Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 DLG5-AS1-201ENST00000449852 487 ntTSL 2 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 EIF3LP2-201ENST00000457262 807 ntBASIC8.74□□□□□ -1.01
HLA-DOAP06340 RPL21P42-201ENST00000488408 464 ntBASIC8.74□□□□□ -1.01
HLA-DOAP06340 MTCO1P55-201ENST00000489829 745 ntBASIC8.74□□□□□ -1.01
HLA-DOAP06340 RNA5SP96-201ENST00000516041 107 ntBASIC8.74□□□□□ -1.01
HLA-DOAP06340 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 PDCL3P1-201ENST00000534575 734 ntBASIC8.74□□□□□ -1.01
HLA-DOAP06340 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 AC009117.3-201ENST00000568136 543 ntTSL 4 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 FCGR1CP-201ENST00000579737 1127 ntBASIC8.74□□□□□ -1.01
HLA-DOAP06340 ZNF730-201ENST00000593635 464 ntTSL 3 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 AC074135.1-202ENST00000600223 563 ntTSL 3 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 AC097376.1-201ENST00000602907 997 ntBASIC8.74□□□□□ -1.01
HLA-DOAP06340 AC097381.3-201ENST00000608962 462 ntBASIC8.74□□□□□ -1.01
HLA-DOAP06340 pRNA.12-201ENST00000614353 90 ntBASIC8.74□□□□□ -1.01
HLA-DOAP06340 pRNA.3-201ENST00000615048 90 ntBASIC8.74□□□□□ -1.01
HLA-DOAP06340 KRTAP4-1-202ENST00000620667 737 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
HLA-DOAP06340 LINC01994-201ENST00000496220 1808 ntTSL 2 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 AC097717.1-227ENST00000594069 1322 ntTSL 5 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 MET-204ENST00000436117 2295 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
HLA-DOAP06340 GULP1-203ENST00000409609 1932 ntAPPRIS P3 TSL 2 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 ASH1L-202ENST00000392403 10979 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
HLA-DOAP06340 CYP4A11-201ENST00000310638 2530 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
HLA-DOAP06340 ABCF2-202ENST00000287844 3546 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
HLA-DOAP06340 AP003471.1-202ENST00000319051 1988 ntBASIC8.73□□□□□ -1.01
HLA-DOAP06340 R3HDM2P1-201ENST00000505381 1960 ntBASIC8.73□□□□□ -1.01
HLA-DOAP06340 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HLA-DOAP06340 EXOC6-201ENST00000260762 3564 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HLA-DOAP06340 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HLA-DOAP06340 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HLA-DOAP06340 WNK1-220ENST00000574564 1401 ntBASIC8.73□□□□□ -1.01
HLA-DOAP06340 AMOT-201ENST00000304758 6888 ntAPPRIS P3 TSL 1 (best) BASIC8.73□□□□□ -1.01
HLA-DOAP06340 SERPINA11-201ENST00000334708 1476 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HLA-DOAP06340 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HLA-DOAP06340 DHX57-203ENST00000457308 4859 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HLA-DOAP06340 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC8.73□□□□□ -1.01
HLA-DOAP06340 AL662791.3-201ENST00000413771 776 ntBASIC8.73□□□□□ -1.01
HLA-DOAP06340 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC8.73□□□□□ -1.01
HLA-DOAP06340 EIF4A1P5-201ENST00000428062 1095 ntBASIC8.73□□□□□ -1.01
HLA-DOAP06340 Z83313.1-201ENST00000433780 718 ntBASIC8.73□□□□□ -1.01
HLA-DOAP06340 AL731892.1-201ENST00000437364 1192 ntBASIC8.73□□□□□ -1.01
HLA-DOAP06340 AC123904.1-201ENST00000441072 368 ntBASIC8.73□□□□□ -1.01
HLA-DOAP06340 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC8.73□□□□□ -1.01
HLA-DOAP06340 SLAMF6P1-201ENST00000451067 602 ntBASIC8.73□□□□□ -1.01
HLA-DOAP06340 GCSHP1-201ENST00000512554 484 ntBASIC8.73□□□□□ -1.01
HLA-DOAP06340 IGHVIII-11-1-201ENST00000522733 267 ntBASIC8.73□□□□□ -1.01
HLA-DOAP06340 OVCH1-AS1-202ENST00000550906 654 ntTSL 3 BASIC8.73□□□□□ -1.01
HLA-DOAP06340 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC8.73□□□□□ -1.01
HLA-DOAP06340 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC8.73□□□□□ -1.01
HLA-DOAP06340 AC138749.2-201ENST00000566048 167 ntBASIC8.73□□□□□ -1.01
HLA-DOAP06340 THSD4-AS1-204ENST00000566268 468 ntTSL 4 BASIC8.73□□□□□ -1.01
HLA-DOAP06340 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC8.73□□□□□ -1.01
HLA-DOAP06340 RBM4-213ENST00000578778 582 ntTSL 4 BASIC8.73□□□□□ -1.01
HLA-DOAP06340 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC8.73□□□□□ -1.01
HLA-DOAP06340 AC097717.1-225ENST00000600829 709 ntTSL 5 BASIC8.73□□□□□ -1.01
HLA-DOAP06340 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC8.73□□□□□ -1.01
HLA-DOAP06340 HOTTIP_2.1-201ENST00000616633 376 ntBASIC8.73□□□□□ -1.01
HLA-DOAP06340 AC099654.11-201ENST00000638857 294 ntBASIC8.73□□□□□ -1.01
HLA-DOAP06340 DICER1-214ENST00000556045 2776 ntTSL 2 BASIC8.73□□□□□ -1.01
HLA-DOAP06340 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HLA-DOAP06340 MAPK10-244ENST00000639972 2818 ntTSL 5 BASIC8.73□□□□□ -1.01
HLA-DOAP06340 AC145138.1-201ENST00000512908 2851 ntBASIC8.73□□□□□ -1.01
HLA-DOAP06340 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HLA-DOAP06340 HINFP-201ENST00000350777 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HLA-DOAP06340 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
HLA-DOAP06340 NOTCH2-206ENST00000579475 2954 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
HLA-DOAP06340 STON2-209ENST00000614646 2964 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
HLA-DOAP06340 XRCC6P4-201ENST00000518193 2067 ntBASIC8.73□□□□□ -1.01
HLA-DOAP06340 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
HLA-DOAP06340 AC063923.1-201ENST00000478982 1619 ntBASIC8.72□□□□□ -1.01
HLA-DOAP06340 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-DOAP06340 RFX5-201ENST00000290524 3576 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-DOAP06340 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-DOAP06340 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-DOAP06340 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
HLA-DOAP06340 SEPT7P2-202ENST00000398921 823 ntBASIC8.72□□□□□ -1.01
HLA-DOAP06340 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 AC012497.1-201ENST00000429392 575 ntBASIC8.72□□□□□ -1.01
HLA-DOAP06340 AC073900.1-201ENST00000429766 776 ntBASIC8.72□□□□□ -1.01
HLA-DOAP06340 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 AC007365.1-201ENST00000439964 627 ntTSL 2 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 PMS2P11-201ENST00000451831 574 ntBASIC8.72□□□□□ -1.01
HLA-DOAP06340 PTMAP1-205ENST00000455552 325 ntBASIC8.72□□□□□ -1.01
HLA-DOAP06340 RPS14P7-201ENST00000473701 448 ntBASIC8.72□□□□□ -1.01
HLA-DOAP06340 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC8.72□□□□□ -1.01
HLA-DOAP06340 AP003084.1-201ENST00000524828 742 ntBASIC8.72□□□□□ -1.01
HLA-DOAP06340 AC007611.1-202ENST00000564212 854 ntTSL 3 BASIC8.72□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms