Protein–RNA interactions for Protein: Q9Y5F1

PCDHB12, Protocadherin beta-12, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB12Q9Y5F1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB12Q9Y5F1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHB12Q9Y5F1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB12Q9Y5F1 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.63■■□□□ 1.05
PCDHB12Q9Y5F1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.63■■□□□ 1.05
PCDHB12Q9Y5F1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PCDHB12Q9Y5F1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB12Q9Y5F1 CD177P1-201ENST00000606252 935 ntBASIC21.63■■□□□ 1.05
PCDHB12Q9Y5F1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.63■■□□□ 1.05
PCDHB12Q9Y5F1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PCDHB12Q9Y5F1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PCDHB12Q9Y5F1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB12Q9Y5F1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB12Q9Y5F1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB12Q9Y5F1 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB12Q9Y5F1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB12Q9Y5F1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.62■■□□□ 1.05
PCDHB12Q9Y5F1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
PCDHB12Q9Y5F1 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB12Q9Y5F1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
PCDHB12Q9Y5F1 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
PCDHB12Q9Y5F1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHB12Q9Y5F1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB12Q9Y5F1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC21.62■■□□□ 1.05
PCDHB12Q9Y5F1 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC21.62■■□□□ 1.05
PCDHB12Q9Y5F1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB12Q9Y5F1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB12Q9Y5F1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
PCDHB12Q9Y5F1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PCDHB12Q9Y5F1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 MMP23A-201ENST00000234610 1017 ntBASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 RCN1P1-201ENST00000400413 996 ntBASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 AL024507.2-201ENST00000606070 2574 ntBASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PCDHB12Q9Y5F1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 AL353708.3-201ENST00000610272 989 ntBASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 AL121906.2-201ENST00000621597 723 ntBASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PCDHB12Q9Y5F1 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 AC004264.1-201ENST00000608354 794 ntBASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PCDHB12Q9Y5F1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
PCDHB12Q9Y5F1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms