Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 POU5F1P4-201ENST00000413175 1085 ntBASIC16.03■□□□□ 0.16
LSM4Q9Y4Z0 AC007322.1-201ENST00000426983 750 ntBASIC16.03■□□□□ 0.16
LSM4Q9Y4Z0 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LSM4Q9Y4Z0 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.03■□□□□ 0.16
LSM4Q9Y4Z0 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
LSM4Q9Y4Z0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
LSM4Q9Y4Z0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LSM4Q9Y4Z0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
LSM4Q9Y4Z0 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LSM4Q9Y4Z0 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
LSM4Q9Y4Z0 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LSM4Q9Y4Z0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LSM4Q9Y4Z0 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
LSM4Q9Y4Z0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
LSM4Q9Y4Z0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
LSM4Q9Y4Z0 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 AL020996.1-203ENST00000536896 2307 ntBASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 SLC7A5P2-201ENST00000553010 536 ntBASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 MIR2861-201ENST00000636310 90 ntBASIC16.02■□□□□ 0.16
LSM4Q9Y4Z0 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.02■□□□□ 0.15
LSM4Q9Y4Z0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LSM4Q9Y4Z0 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
LSM4Q9Y4Z0 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
LSM4Q9Y4Z0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
LSM4Q9Y4Z0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.02■□□□□ 0.15
LSM4Q9Y4Z0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 AL158211.5-201ENST00000623583 2518 ntBASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 GUSBP6-202ENST00000438529 1198 ntBASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 AC005181.1-201ENST00000604782 1256 ntBASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 AC008175.2-201ENST00000612840 297 ntBASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
LSM4Q9Y4Z0 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC16■□□□□ 0.15
LSM4Q9Y4Z0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16■□□□□ 0.15
LSM4Q9Y4Z0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
LSM4Q9Y4Z0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16■□□□□ 0.15
LSM4Q9Y4Z0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
LSM4Q9Y4Z0 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LSM4Q9Y4Z0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
LSM4Q9Y4Z0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16■□□□□ 0.15
LSM4Q9Y4Z0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16■□□□□ 0.15
LSM4Q9Y4Z0 TSPY20P-201ENST00000450910 630 ntBASIC16■□□□□ 0.15
LSM4Q9Y4Z0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16■□□□□ 0.15
LSM4Q9Y4Z0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16■□□□□ 0.15
LSM4Q9Y4Z0 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16■□□□□ 0.15
LSM4Q9Y4Z0 KRT18P6-201ENST00000555540 1265 ntBASIC16■□□□□ 0.15
LSM4Q9Y4Z0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16■□□□□ 0.15
LSM4Q9Y4Z0 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16■□□□□ 0.15
LSM4Q9Y4Z0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16■□□□□ 0.15
LSM4Q9Y4Z0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16■□□□□ 0.15
LSM4Q9Y4Z0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16■□□□□ 0.15
LSM4Q9Y4Z0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16■□□□□ 0.15
LSM4Q9Y4Z0 UBE2DNL-204ENST00000602536 740 ntBASIC16■□□□□ 0.15
LSM4Q9Y4Z0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LSM4Q9Y4Z0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms