Protein–RNA interactions for Protein: Q9NP91

SLC6A20, Sodium- and chloride-dependent transporter XTRP3, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20Q9NP91 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SLC6A20Q9NP91 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.29■□□□□ 0.68
SLC6A20Q9NP91 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SLC6A20Q9NP91 AL162377.1-201ENST00000618844 1793 ntBASIC19.29■□□□□ 0.68
SLC6A20Q9NP91 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.29■□□□□ 0.68
SLC6A20Q9NP91 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 SOX15-203ENST00000570788 1093 ntBASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 ITM2C-210ENST00000620962 501 ntBASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 AC006557.6-201ENST00000623071 864 ntBASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SLC6A20Q9NP91 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 KRT8P17-201ENST00000453110 1448 ntBASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 KRT18P29-201ENST00000397031 1267 ntBASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 OR2A1-AS1-207ENST00000486094 819 ntBASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 AC066615.1-201ENST00000640911 628 ntBASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SLC6A20Q9NP91 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC6A20Q9NP91 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SLC6A20Q9NP91 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC6A20Q9NP91 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC6A20Q9NP91 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC6A20Q9NP91 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC6A20Q9NP91 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
SLC6A20Q9NP91 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 KRT8P20-201ENST00000423953 1409 ntBASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 AC008687.6-201ENST00000596318 630 ntBASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SLC6A20Q9NP91 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.25■□□□□ 0.67
SLC6A20Q9NP91 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.25■□□□□ 0.67
SLC6A20Q9NP91 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC6A20Q9NP91 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
SLC6A20Q9NP91 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A20Q9NP91 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A20Q9NP91 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A20Q9NP91 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A20Q9NP91 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A20Q9NP91 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SLC6A20Q9NP91 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.25■□□□□ 0.67
SLC6A20Q9NP91 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.25■□□□□ 0.67
SLC6A20Q9NP91 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A20Q9NP91 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.25■□□□□ 0.67
SLC6A20Q9NP91 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.25■□□□□ 0.67
SLC6A20Q9NP91 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A20Q9NP91 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A20Q9NP91 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SLC6A20Q9NP91 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
SLC6A20Q9NP91 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms