Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 AC087742.1-201ENST00000575880 1738 ntBASIC18.87■□□□□ 0.61
CHD8Q9HCK8 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 AC010542.4-201ENST00000563151 1910 ntBASIC18.87■□□□□ 0.61
CHD8Q9HCK8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.87■□□□□ 0.61
CHD8Q9HCK8 HYMAI.1-201ENST00000620949 238 ntBASIC18.87■□□□□ 0.61
CHD8Q9HCK8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.86■□□□□ 0.61
CHD8Q9HCK8 AC026471.6-201ENST00000622954 1905 ntBASIC18.86■□□□□ 0.61
CHD8Q9HCK8 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD8Q9HCK8 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD8Q9HCK8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHD8Q9HCK8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CHD8Q9HCK8 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.86■□□□□ 0.61
CHD8Q9HCK8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.86■□□□□ 0.61
CHD8Q9HCK8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.86■□□□□ 0.61
CHD8Q9HCK8 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD8Q9HCK8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.86■□□□□ 0.61
CHD8Q9HCK8 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD8Q9HCK8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CHD8Q9HCK8 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CHD8Q9HCK8 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC18.86■□□□□ 0.61
CHD8Q9HCK8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.86■□□□□ 0.61
CHD8Q9HCK8 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.86■□□□□ 0.61
CHD8Q9HCK8 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.86■□□□□ 0.61
CHD8Q9HCK8 IFNL4P1-201ENST00000607083 540 ntBASIC18.86■□□□□ 0.61
CHD8Q9HCK8 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.86■□□□□ 0.61
CHD8Q9HCK8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHD8Q9HCK8 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.85■□□□□ 0.61
CHD8Q9HCK8 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHD8Q9HCK8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHD8Q9HCK8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHD8Q9HCK8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHD8Q9HCK8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHD8Q9HCK8 MIR3180-1-201ENST00000580374 94 ntBASIC18.85■□□□□ 0.61
CHD8Q9HCK8 MIR3180-3-201ENST00000584616 94 ntBASIC18.85■□□□□ 0.61
CHD8Q9HCK8 AL356652.1-201ENST00000615962 565 ntBASIC18.85■□□□□ 0.61
CHD8Q9HCK8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.85■□□□□ 0.61
CHD8Q9HCK8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CHD8Q9HCK8 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CHD8Q9HCK8 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
CHD8Q9HCK8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.85■□□□□ 0.61
CHD8Q9HCK8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.85■□□□□ 0.61
CHD8Q9HCK8 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
CHD8Q9HCK8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CHD8Q9HCK8 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHD8Q9HCK8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CHD8Q9HCK8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.84■□□□□ 0.61
CHD8Q9HCK8 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.84■□□□□ 0.61
CHD8Q9HCK8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHD8Q9HCK8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CHD8Q9HCK8 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHD8Q9HCK8 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CHD8Q9HCK8 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.84■□□□□ 0.61
CHD8Q9HCK8 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CHD8Q9HCK8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.84■□□□□ 0.61
CHD8Q9HCK8 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHD8Q9HCK8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CHD8Q9HCK8 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.83■□□□□ 0.61
CHD8Q9HCK8 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CHD8Q9HCK8 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
CHD8Q9HCK8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD8Q9HCK8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD8Q9HCK8 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.83■□□□□ 0.6
CHD8Q9HCK8 ATP5G2P1-201ENST00000433580 426 ntBASIC18.83■□□□□ 0.6
CHD8Q9HCK8 EMBP1-201ENST00000458200 901 ntBASIC18.83■□□□□ 0.6
CHD8Q9HCK8 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD8Q9HCK8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD8Q9HCK8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD8Q9HCK8 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD8Q9HCK8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.83■□□□□ 0.6
CHD8Q9HCK8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC18.83■□□□□ 0.6
CHD8Q9HCK8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.83■□□□□ 0.6
CHD8Q9HCK8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.83■□□□□ 0.6
CHD8Q9HCK8 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD8Q9HCK8 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.83■□□□□ 0.6
CHD8Q9HCK8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.83■□□□□ 0.6
CHD8Q9HCK8 AL136038.3-201ENST00000561909 1096 ntBASIC18.83■□□□□ 0.6
CHD8Q9HCK8 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CHD8Q9HCK8 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
CHD8Q9HCK8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHD8Q9HCK8 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHD8Q9HCK8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.82■□□□□ 0.6
CHD8Q9HCK8 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHD8Q9HCK8 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHD8Q9HCK8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
CHD8Q9HCK8 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.82■□□□□ 0.6
CHD8Q9HCK8 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.82■□□□□ 0.6
CHD8Q9HCK8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CHD8Q9HCK8 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms