Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
S1PR3Q99500 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
S1PR3Q99500 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
S1PR3Q99500 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
S1PR3Q99500 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.55■□□□□ 0.24
S1PR3Q99500 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.55■□□□□ 0.24
S1PR3Q99500 VMO1-204ENST00000441199 741 ntTSL 2 BASIC16.55■□□□□ 0.24
S1PR3Q99500 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC16.55■□□□□ 0.24
S1PR3Q99500 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.55■□□□□ 0.24
S1PR3Q99500 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.55■□□□□ 0.24
S1PR3Q99500 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
S1PR3Q99500 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
S1PR3Q99500 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
S1PR3Q99500 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
S1PR3Q99500 AC112907.3-201ENST00000577781 2400 ntBASIC16.55■□□□□ 0.24
S1PR3Q99500 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
S1PR3Q99500 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
S1PR3Q99500 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
S1PR3Q99500 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
S1PR3Q99500 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
S1PR3Q99500 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.54■□□□□ 0.24
S1PR3Q99500 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
S1PR3Q99500 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.54■□□□□ 0.24
S1PR3Q99500 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
S1PR3Q99500 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
S1PR3Q99500 METTL26-203ENST00000397664 604 ntTSL 2 BASIC16.54■□□□□ 0.24
S1PR3Q99500 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC16.54■□□□□ 0.24
S1PR3Q99500 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.54■□□□□ 0.24
S1PR3Q99500 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
S1PR3Q99500 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC16.54■□□□□ 0.24
S1PR3Q99500 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
S1PR3Q99500 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
S1PR3Q99500 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.54■□□□□ 0.24
S1PR3Q99500 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.54■□□□□ 0.24
S1PR3Q99500 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC16.54■□□□□ 0.24
S1PR3Q99500 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
S1PR3Q99500 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
S1PR3Q99500 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.54■□□□□ 0.24
S1PR3Q99500 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
S1PR3Q99500 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.54■□□□□ 0.24
S1PR3Q99500 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
S1PR3Q99500 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
S1PR3Q99500 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
S1PR3Q99500 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
S1PR3Q99500 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
S1PR3Q99500 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
S1PR3Q99500 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
S1PR3Q99500 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
S1PR3Q99500 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.53■□□□□ 0.24
S1PR3Q99500 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC16.53■□□□□ 0.24
S1PR3Q99500 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
S1PR3Q99500 DUX4L16-201ENST00000555130 1264 ntBASIC16.53■□□□□ 0.24
S1PR3Q99500 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
S1PR3Q99500 AC080038.1-201ENST00000611274 1154 ntBASIC16.53■□□□□ 0.24
S1PR3Q99500 MDK-213ENST00000617138 635 ntTSL 2 BASIC16.53■□□□□ 0.24
S1PR3Q99500 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
S1PR3Q99500 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
S1PR3Q99500 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
S1PR3Q99500 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC16.53■□□□□ 0.24
S1PR3Q99500 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
S1PR3Q99500 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC16.53■□□□□ 0.24
S1PR3Q99500 AC087633.2-202ENST00000565166 1439 ntBASIC16.53■□□□□ 0.24
S1PR3Q99500 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
S1PR3Q99500 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
S1PR3Q99500 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
S1PR3Q99500 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
S1PR3Q99500 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
S1PR3Q99500 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC16.52■□□□□ 0.24
S1PR3Q99500 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.52■□□□□ 0.24
S1PR3Q99500 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.52■□□□□ 0.24
S1PR3Q99500 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
S1PR3Q99500 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
S1PR3Q99500 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
S1PR3Q99500 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
S1PR3Q99500 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
S1PR3Q99500 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC16.52■□□□□ 0.24
S1PR3Q99500 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
S1PR3Q99500 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC16.52■□□□□ 0.24
S1PR3Q99500 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.52■□□□□ 0.24
S1PR3Q99500 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
S1PR3Q99500 AL356652.1-201ENST00000615962 565 ntBASIC16.52■□□□□ 0.24
S1PR3Q99500 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
S1PR3Q99500 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
S1PR3Q99500 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
S1PR3Q99500 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
S1PR3Q99500 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
S1PR3Q99500 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
S1PR3Q99500 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC16.52■□□□□ 0.23
S1PR3Q99500 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
S1PR3Q99500 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
S1PR3Q99500 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
S1PR3Q99500 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
S1PR3Q99500 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
S1PR3Q99500 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.51■□□□□ 0.23
S1PR3Q99500 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
S1PR3Q99500 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
S1PR3Q99500 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.51■□□□□ 0.23
S1PR3Q99500 DLX3-202ENST00000512495 834 ntTSL 2 BASIC16.51■□□□□ 0.23
S1PR3Q99500 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.51■□□□□ 0.23
S1PR3Q99500 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms