Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC17.72■□□□□ 0.43
TMEM54Q969K7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
TMEM54Q969K7 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM54Q969K7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM54Q969K7 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM54Q969K7 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM54Q969K7 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.72■□□□□ 0.43
TMEM54Q969K7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM54Q969K7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM54Q969K7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEM54Q969K7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM54Q969K7 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM54Q969K7 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM54Q969K7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TMEM54Q969K7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.71■□□□□ 0.43
TMEM54Q969K7 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM54Q969K7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TMEM54Q969K7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEM54Q969K7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.71■□□□□ 0.43
TMEM54Q969K7 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.71■□□□□ 0.43
TMEM54Q969K7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM54Q969K7 MYC-209ENST00000641252 345 ntBASIC17.71■□□□□ 0.43
TMEM54Q969K7 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM54Q969K7 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.71■□□□□ 0.43
TMEM54Q969K7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEM54Q969K7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM54Q969K7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEM54Q969K7 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM54Q969K7 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM54Q969K7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.71■□□□□ 0.43
TMEM54Q969K7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC17.71■□□□□ 0.43
TMEM54Q969K7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.42
TMEM54Q969K7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TMEM54Q969K7 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.42
TMEM54Q969K7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.71■□□□□ 0.42
TMEM54Q969K7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
TMEM54Q969K7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.7■□□□□ 0.42
TMEM54Q969K7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM54Q969K7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM54Q969K7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM54Q969K7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM54Q969K7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM54Q969K7 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM54Q969K7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM54Q969K7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM54Q969K7 AC073210.2-201ENST00000430369 194 ntBASIC17.7■□□□□ 0.42
TMEM54Q969K7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.7■□□□□ 0.42
TMEM54Q969K7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM54Q969K7 AC142086.2-201ENST00000569753 217 ntBASIC17.7■□□□□ 0.42
TMEM54Q969K7 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM54Q969K7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
TMEM54Q969K7 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM54Q969K7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM54Q969K7 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM54Q969K7 KRT16P6-202ENST00000425692 1426 ntBASIC17.7■□□□□ 0.42
TMEM54Q969K7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM54Q969K7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM54Q969K7 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM54Q969K7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM54Q969K7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM54Q969K7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM54Q969K7 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM54Q969K7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM54Q969K7 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM54Q969K7 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM54Q969K7 AC112907.3-201ENST00000577781 2400 ntBASIC17.69■□□□□ 0.42
TMEM54Q969K7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM54Q969K7 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM54Q969K7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM54Q969K7 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.69■□□□□ 0.42
TMEM54Q969K7 AC097658.1-201ENST00000475555 843 ntBASIC17.69■□□□□ 0.42
TMEM54Q969K7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM54Q969K7 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.69■□□□□ 0.42
TMEM54Q969K7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TMEM54Q969K7 AC098934.4-201ENST00000564127 592 ntBASIC17.69■□□□□ 0.42
TMEM54Q969K7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM54Q969K7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM54Q969K7 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM54Q969K7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.69■□□□□ 0.42
TMEM54Q969K7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TMEM54Q969K7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM54Q969K7 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM54Q969K7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM54Q969K7 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM54Q969K7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM54Q969K7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM54Q969K7 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM54Q969K7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM54Q969K7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM54Q969K7 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.68■□□□□ 0.42
TMEM54Q969K7 AC133041.1-202ENST00000642053 222 ntBASIC17.68■□□□□ 0.42
TMEM54Q969K7 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM54Q969K7 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM54Q969K7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TMEM54Q969K7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TMEM54Q969K7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.68■□□□□ 0.42
TMEM54Q969K7 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM54Q969K7 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM54Q969K7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TMEM54Q969K7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms