Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF139Q8WU17 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF139Q8WU17 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF139Q8WU17 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF139Q8WU17 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF139Q8WU17 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF139Q8WU17 AL390719.1-204ENST00000412397 1219 ntBASIC21.07■□□□□ 0.96
RNF139Q8WU17 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF139Q8WU17 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.07■□□□□ 0.96
RNF139Q8WU17 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.07■□□□□ 0.96
RNF139Q8WU17 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.07■□□□□ 0.96
RNF139Q8WU17 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.07■□□□□ 0.96
RNF139Q8WU17 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF139Q8WU17 UNC93B5-201ENST00000530315 699 ntBASIC21.07■□□□□ 0.96
RNF139Q8WU17 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF139Q8WU17 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF139Q8WU17 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF139Q8WU17 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RNF139Q8WU17 AC092720.2-201ENST00000602388 1665 ntBASIC21.07■□□□□ 0.96
RNF139Q8WU17 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC21.07■□□□□ 0.96
RNF139Q8WU17 LINC01521-201ENST00000504184 1943 ntBASIC21.07■□□□□ 0.96
RNF139Q8WU17 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF139Q8WU17 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF139Q8WU17 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF139Q8WU17 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF139Q8WU17 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF139Q8WU17 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF139Q8WU17 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF139Q8WU17 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RNF139Q8WU17 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF139Q8WU17 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF139Q8WU17 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF139Q8WU17 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF139Q8WU17 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
RNF139Q8WU17 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF139Q8WU17 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF139Q8WU17 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF139Q8WU17 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF139Q8WU17 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF139Q8WU17 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF139Q8WU17 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF139Q8WU17 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF139Q8WU17 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF139Q8WU17 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF139Q8WU17 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF139Q8WU17 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF139Q8WU17 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF139Q8WU17 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF139Q8WU17 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF139Q8WU17 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF139Q8WU17 ESRRAP1-201ENST00000400596 1257 ntBASIC21.05■□□□□ 0.96
RNF139Q8WU17 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.05■□□□□ 0.96
RNF139Q8WU17 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
RNF139Q8WU17 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF139Q8WU17 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF139Q8WU17 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.05■□□□□ 0.96
RNF139Q8WU17 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF139Q8WU17 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF139Q8WU17 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF139Q8WU17 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
RNF139Q8WU17 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF139Q8WU17 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF139Q8WU17 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF139Q8WU17 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF139Q8WU17 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RNF139Q8WU17 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF139Q8WU17 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF139Q8WU17 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF139Q8WU17 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF139Q8WU17 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF139Q8WU17 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RNF139Q8WU17 POU5F1P3-201ENST00000428824 1078 ntBASIC21.04■□□□□ 0.96
RNF139Q8WU17 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF139Q8WU17 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF139Q8WU17 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF139Q8WU17 AP003097.1-201ENST00000530657 1135 ntBASIC21.04■□□□□ 0.96
RNF139Q8WU17 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF139Q8WU17 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF139Q8WU17 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF139Q8WU17 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF139Q8WU17 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF139Q8WU17 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF139Q8WU17 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF139Q8WU17 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RNF139Q8WU17 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF139Q8WU17 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RNF139Q8WU17 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RNF139Q8WU17 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF139Q8WU17 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RNF139Q8WU17 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RNF139Q8WU17 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF139Q8WU17 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF139Q8WU17 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF139Q8WU17 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.03■□□□□ 0.96
RNF139Q8WU17 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF139Q8WU17 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF139Q8WU17 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF139Q8WU17 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
RNF139Q8WU17 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF139Q8WU17 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms