Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 TMEM191A-211ENST00000637163 1067 ntBASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 LINC01006-201ENST00000333319 2292 ntBASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 UNC93B4-201ENST00000505679 747 ntBASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 AC005829.2-201ENST00000571422 1056 ntBASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 ITM2C-210ENST00000620962 501 ntBASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.48■□□□□ 0.87
PCDH20Q8N6Y1 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PCDH20Q8N6Y1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH20Q8N6Y1 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH20Q8N6Y1 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH20Q8N6Y1 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH20Q8N6Y1 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH20Q8N6Y1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH20Q8N6Y1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDH20Q8N6Y1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
PCDH20Q8N6Y1 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH20Q8N6Y1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDH20Q8N6Y1 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.47■□□□□ 0.87
PCDH20Q8N6Y1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH20Q8N6Y1 SOX15-203ENST00000570788 1093 ntBASIC20.47■□□□□ 0.87
PCDH20Q8N6Y1 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH20Q8N6Y1 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PCDH20Q8N6Y1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.47■□□□□ 0.87
PCDH20Q8N6Y1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 AC008403.3-201ENST00000598924 454 ntBASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PCDH20Q8N6Y1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 KRT18P29-201ENST00000397031 1267 ntBASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 AL390719.1-204ENST00000412397 1219 ntBASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDH20Q8N6Y1 AC023632.3-201ENST00000521633 145 ntBASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms