Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
ARHGEF28Q8N1W1 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
ARHGEF28Q8N1W1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
ARHGEF28Q8N1W1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
ARHGEF28Q8N1W1 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
ARHGEF28Q8N1W1 NIFKP9-201ENST00000419265 221 ntBASIC28.04■■■□□ 2.08
ARHGEF28Q8N1W1 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC28.04■■■□□ 2.08
ARHGEF28Q8N1W1 CD177P1-201ENST00000606252 935 ntBASIC28.04■■■□□ 2.08
ARHGEF28Q8N1W1 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
ARHGEF28Q8N1W1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
ARHGEF28Q8N1W1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
ARHGEF28Q8N1W1 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
ARHGEF28Q8N1W1 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC28.03■■■□□ 2.08
ARHGEF28Q8N1W1 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC28.03■■■□□ 2.08
ARHGEF28Q8N1W1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
ARHGEF28Q8N1W1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC28.03■■■□□ 2.08
ARHGEF28Q8N1W1 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC28.03■■■□□ 2.08
ARHGEF28Q8N1W1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC28.03■■■□□ 2.08
ARHGEF28Q8N1W1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC28.03■■■□□ 2.08
ARHGEF28Q8N1W1 REXO1L10P-201ENST00000615707 1290 ntBASIC28.03■■■□□ 2.08
ARHGEF28Q8N1W1 REXO1L12P-201ENST00000622156 912 ntBASIC28.03■■■□□ 2.08
ARHGEF28Q8N1W1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC28.03■■■□□ 2.08
ARHGEF28Q8N1W1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
ARHGEF28Q8N1W1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC28.02■■■□□ 2.08
ARHGEF28Q8N1W1 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ARHGEF28Q8N1W1 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ARHGEF28Q8N1W1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC28.02■■■□□ 2.08
ARHGEF28Q8N1W1 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ARHGEF28Q8N1W1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
ARHGEF28Q8N1W1 AP003071.4-201ENST00000562276 1284 ntBASIC28.02■■■□□ 2.08
ARHGEF28Q8N1W1 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC28.02■■■□□ 2.08
ARHGEF28Q8N1W1 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC28.02■■■□□ 2.08
ARHGEF28Q8N1W1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
ARHGEF28Q8N1W1 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
ARHGEF28Q8N1W1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC28.02■■■□□ 2.08
ARHGEF28Q8N1W1 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
ARHGEF28Q8N1W1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC28.01■■■□□ 2.08
ARHGEF28Q8N1W1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
ARHGEF28Q8N1W1 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC28.01■■■□□ 2.07
ARHGEF28Q8N1W1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
ARHGEF28Q8N1W1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
ARHGEF28Q8N1W1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
ARHGEF28Q8N1W1 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
ARHGEF28Q8N1W1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC28.01■■■□□ 2.07
ARHGEF28Q8N1W1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
ARHGEF28Q8N1W1 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
ARHGEF28Q8N1W1 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC28.01■■■□□ 2.07
ARHGEF28Q8N1W1 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC28.01■■■□□ 2.07
ARHGEF28Q8N1W1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC28.01■■■□□ 2.07
ARHGEF28Q8N1W1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
ARHGEF28Q8N1W1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC28■■■□□ 2.07
ARHGEF28Q8N1W1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
ARHGEF28Q8N1W1 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC28■■■□□ 2.07
ARHGEF28Q8N1W1 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC28■■■□□ 2.07
ARHGEF28Q8N1W1 AC211429.1-201ENST00000415277 523 ntBASIC28■■■□□ 2.07
ARHGEF28Q8N1W1 SAPCD2P4-201ENST00000424595 1171 ntBASIC28■■■□□ 2.07
ARHGEF28Q8N1W1 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC28■■■□□ 2.07
ARHGEF28Q8N1W1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC28■■■□□ 2.07
ARHGEF28Q8N1W1 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC28■■■□□ 2.07
ARHGEF28Q8N1W1 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC28■■■□□ 2.07
ARHGEF28Q8N1W1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC28■■■□□ 2.07
ARHGEF28Q8N1W1 BID-203ENST00000399765 1879 ntTSL 2 BASIC28■■■□□ 2.07
ARHGEF28Q8N1W1 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC27.99■■■□□ 2.07
ARHGEF28Q8N1W1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC27.99■■■□□ 2.07
ARHGEF28Q8N1W1 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC27.99■■■□□ 2.07
ARHGEF28Q8N1W1 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
ARHGEF28Q8N1W1 AC026310.3-201ENST00000625186 2373 ntBASIC27.99■■■□□ 2.07
ARHGEF28Q8N1W1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
ARHGEF28Q8N1W1 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC27.99■■■□□ 2.07
ARHGEF28Q8N1W1 KRT8P9-201ENST00000558927 1449 ntBASIC27.99■■■□□ 2.07
ARHGEF28Q8N1W1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
ARHGEF28Q8N1W1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC27.98■■■□□ 2.07
ARHGEF28Q8N1W1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC27.98■■■□□ 2.07
ARHGEF28Q8N1W1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC27.98■■■□□ 2.07
ARHGEF28Q8N1W1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC27.98■■■□□ 2.07
ARHGEF28Q8N1W1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC27.98■■■□□ 2.07
ARHGEF28Q8N1W1 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC27.98■■■□□ 2.07
ARHGEF28Q8N1W1 FAM197Y1-201ENST00000421178 764 ntBASIC27.98■■■□□ 2.07
ARHGEF28Q8N1W1 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
ARHGEF28Q8N1W1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC27.98■■■□□ 2.07
ARHGEF28Q8N1W1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC27.98■■■□□ 2.07
ARHGEF28Q8N1W1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
ARHGEF28Q8N1W1 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
ARHGEF28Q8N1W1 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
ARHGEF28Q8N1W1 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
ARHGEF28Q8N1W1 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
ARHGEF28Q8N1W1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
ARHGEF28Q8N1W1 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC27.97■■■□□ 2.07
ARHGEF28Q8N1W1 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC27.97■■■□□ 2.07
ARHGEF28Q8N1W1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC27.97■■■□□ 2.07
ARHGEF28Q8N1W1 RCN1P1-201ENST00000400413 996 ntBASIC27.97■■■□□ 2.07
ARHGEF28Q8N1W1 YBX1P10-201ENST00000444752 975 ntBASIC27.97■■■□□ 2.07
ARHGEF28Q8N1W1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
ARHGEF28Q8N1W1 DPP3P2-201ENST00000416030 1696 ntBASIC27.97■■■□□ 2.07
ARHGEF28Q8N1W1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
ARHGEF28Q8N1W1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC27.97■■■□□ 2.07
ARHGEF28Q8N1W1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
ARHGEF28Q8N1W1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC27.97■■■□□ 2.07
ARHGEF28Q8N1W1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC27.96■■■□□ 2.07
ARHGEF28Q8N1W1 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC27.96■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms