Protein–RNA interactions for Protein: Q5VTA0

PRAMEF17, PRAME family member 17, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF17Q5VTA0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF17Q5VTA0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF17Q5VTA0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF17Q5VTA0 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF17Q5VTA0 AC124283.5-201ENST00000624661 1809 ntBASIC19.16■□□□□ 0.66
PRAMEF17Q5VTA0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF17Q5VTA0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF17Q5VTA0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.16■□□□□ 0.66
PRAMEF17Q5VTA0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PRAMEF17Q5VTA0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 AC008550.1-201ENST00000511500 884 ntBASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PRAMEF17Q5VTA0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.14■□□□□ 0.66
PRAMEF17Q5VTA0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
PRAMEF17Q5VTA0 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF17Q5VTA0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF17Q5VTA0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF17Q5VTA0 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF17Q5VTA0 UBE2SP1-201ENST00000450587 669 ntBASIC19.14■□□□□ 0.65
PRAMEF17Q5VTA0 ABHD17AP6-201ENST00000458502 1044 ntBASIC19.14■□□□□ 0.65
PRAMEF17Q5VTA0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.14■□□□□ 0.65
PRAMEF17Q5VTA0 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.14■□□□□ 0.65
PRAMEF17Q5VTA0 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.14■□□□□ 0.65
PRAMEF17Q5VTA0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF17Q5VTA0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.14■□□□□ 0.65
PRAMEF17Q5VTA0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF17Q5VTA0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF17Q5VTA0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PRAMEF17Q5VTA0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF17Q5VTA0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PRAMEF17Q5VTA0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF17Q5VTA0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF17Q5VTA0 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF17Q5VTA0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF17Q5VTA0 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.13■□□□□ 0.65
PRAMEF17Q5VTA0 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.13■□□□□ 0.65
PRAMEF17Q5VTA0 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF17Q5VTA0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.13■□□□□ 0.65
PRAMEF17Q5VTA0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF17Q5VTA0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF17Q5VTA0 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF17Q5VTA0 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF17Q5VTA0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.13■□□□□ 0.65
PRAMEF17Q5VTA0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.13■□□□□ 0.65
PRAMEF17Q5VTA0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PRAMEF17Q5VTA0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.13■□□□□ 0.65
PRAMEF17Q5VTA0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
PRAMEF17Q5VTA0 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
PRAMEF17Q5VTA0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 AC006128.1-201ENST00000624704 1661 ntBASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PRAMEF17Q5VTA0 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms