Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.33■■□□□ 1
VARS2Q5ST30 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VARS2Q5ST30 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
VARS2Q5ST30 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.32■■□□□ 1
VARS2Q5ST30 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VARS2Q5ST30 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
VARS2Q5ST30 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.32■■□□□ 1
VARS2Q5ST30 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC21.32■■□□□ 1
VARS2Q5ST30 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC21.32■■□□□ 1
VARS2Q5ST30 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.32■■□□□ 1
VARS2Q5ST30 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.32■■□□□ 1
VARS2Q5ST30 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
VARS2Q5ST30 KRT8P20-201ENST00000423953 1409 ntBASIC21.32■■□□□ 1
VARS2Q5ST30 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.32■■□□□ 1
VARS2Q5ST30 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
VARS2Q5ST30 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
VARS2Q5ST30 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.32■■□□□ 1
VARS2Q5ST30 AL031963.3-201ENST00000606441 850 ntBASIC21.32■■□□□ 1
VARS2Q5ST30 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
VARS2Q5ST30 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.32■■□□□ 1
VARS2Q5ST30 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
VARS2Q5ST30 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
VARS2Q5ST30 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
VARS2Q5ST30 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
VARS2Q5ST30 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.32■■□□□ 1
VARS2Q5ST30 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.31■■□□□ 1
VARS2Q5ST30 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
VARS2Q5ST30 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.31■■□□□ 1
VARS2Q5ST30 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC21.31■■□□□ 1
VARS2Q5ST30 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VARS2Q5ST30 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VARS2Q5ST30 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
VARS2Q5ST30 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VARS2Q5ST30 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.31■■□□□ 1
VARS2Q5ST30 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC21.31■■□□□ 1
VARS2Q5ST30 AL121906.2-201ENST00000621597 723 ntBASIC21.31■■□□□ 1
VARS2Q5ST30 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.31■■□□□ 1
VARS2Q5ST30 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
VARS2Q5ST30 AC005229.4-201ENST00000610085 2198 ntBASIC21.31■■□□□ 1
VARS2Q5ST30 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
VARS2Q5ST30 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.31■■□□□ 1
VARS2Q5ST30 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.31■■□□□ 1
VARS2Q5ST30 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.31■■□□□ 1
VARS2Q5ST30 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.31■■□□□ 1
VARS2Q5ST30 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.31■■□□□ 1
VARS2Q5ST30 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VARS2Q5ST30 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
VARS2Q5ST30 AL135905.2-201ENST00000584934 1404 ntBASIC21.3■■□□□ 1
VARS2Q5ST30 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.3■■□□□ 1
VARS2Q5ST30 AC007225.1-201ENST00000566331 1836 ntBASIC21.3■■□□□ 1
VARS2Q5ST30 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC21.3■■□□□ 1
VARS2Q5ST30 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VARS2Q5ST30 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.3■■□□□ 1
VARS2Q5ST30 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
VARS2Q5ST30 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.3■■□□□ 1
VARS2Q5ST30 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.3■■□□□ 1
VARS2Q5ST30 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.3■■□□□ 1
VARS2Q5ST30 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.3■■□□□ 1
VARS2Q5ST30 RARRES2P10-201ENST00000564312 460 ntBASIC21.3■■□□□ 1
VARS2Q5ST30 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
VARS2Q5ST30 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
VARS2Q5ST30 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
VARS2Q5ST30 AL049637.2-201ENST00000641778 930 ntBASIC21.3■■□□□ 1
VARS2Q5ST30 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.3■■□□□ 1
VARS2Q5ST30 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.29■■□□□ 1
VARS2Q5ST30 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.29■■□□□ 1
VARS2Q5ST30 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
VARS2Q5ST30 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.29■■□□□ 1
VARS2Q5ST30 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VARS2Q5ST30 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC21.29■■□□□ 1
VARS2Q5ST30 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VARS2Q5ST30 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
VARS2Q5ST30 AC211429.1-201ENST00000415277 523 ntBASIC21.29■■□□□ 1
VARS2Q5ST30 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
VARS2Q5ST30 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.29■■□□□ 1
VARS2Q5ST30 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21.29■■□□□ 1
VARS2Q5ST30 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
VARS2Q5ST30 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
VARS2Q5ST30 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VARS2Q5ST30 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC21.29■■□□□ 1
VARS2Q5ST30 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
VARS2Q5ST30 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
VARS2Q5ST30 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
VARS2Q5ST30 NBPF21P-201ENST00000425093 1451 ntBASIC21.28■■□□□ 1
VARS2Q5ST30 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
VARS2Q5ST30 TSPY7P-201ENST00000431358 1114 ntBASIC21.28■■□□□ 1
VARS2Q5ST30 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC21.28■■□□□ 1
VARS2Q5ST30 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.28■■□□□ 1
VARS2Q5ST30 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
VARS2Q5ST30 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.28■■□□□ 1
VARS2Q5ST30 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC21.28■■□□□ 1
VARS2Q5ST30 REXO1L12P-201ENST00000622156 912 ntBASIC21.28■■□□□ 1
VARS2Q5ST30 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.28■■□□□ 1
VARS2Q5ST30 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
VARS2Q5ST30 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
VARS2Q5ST30 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC21.28■■□□□ 1
VARS2Q5ST30 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.28■■□□□ 1
VARS2Q5ST30 KRT8P17-201ENST00000453110 1448 ntBASIC21.28■■□□□ 1
VARS2Q5ST30 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.28■■□□□ 1
VARS2Q5ST30 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms