Protein–RNA interactions for Protein: Q04487

SHH3, Mitochondrial inner membrane protein SHH3, yeastyeast

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH3Q04487 PBI2YNL015W 228 nt0.25□□□□□ -2.37
SHH3Q04487 YOR029WYOR029W 336 nt0.25□□□□□ -2.37
SHH3Q04487 CUL3YGR003W 2235 nt0.24□□□□□ -2.37
SHH3Q04487 YDL011CYDL011C 324 nt0.24□□□□□ -2.37
SHH3Q04487 YEL030C-AYEL030C-A 315 nt0.24□□□□□ -2.37
SHH3Q04487 YIR044CYIR044C 186 nt0.24□□□□□ -2.37
SHH3Q04487 RPL26AYLR344W 384 nt0.24□□□□□ -2.37
SHH3Q04487 YBL071CYBL071C 309 nt0.24□□□□□ -2.37
SHH3Q04487 YBR206WYBR206W 324 nt0.24□□□□□ -2.37
SHH3Q04487 FMP27YLR454W 7887 nt0.24□□□□□ -2.37
SHH3Q04487 FYV10YIL097W 1551 nt0.23□□□□□ -2.37
SHH3Q04487 YOR192C-CYOR192C-C 237 nt0.23□□□□□ -2.37
SHH3Q04487 ASE1YOR058C 2658 nt0.23□□□□□ -2.37
SHH3Q04487 YFR012W-AYFR012W-A 87 nt0.22□□□□□ -2.37
SHH3Q04487 YHR125WYHR125W 306 nt0.22□□□□□ -2.37
SHH3Q04487 EAF6YJR082C 342 nt0.22□□□□□ -2.37
SHH3Q04487 INP2YMR163C 2118 nt0.22□□□□□ -2.37
SHH3Q04487 YHL041WYHL041W 450 nt0.21□□□□□ -2.38
SHH3Q04487 MAM33YIL070C 801 nt0.21□□□□□ -2.38
SHH3Q04487 YJL127W-AYJL127W-A 117 nt0.21□□□□□ -2.38
SHH3Q04487 YJR011CYJR011C 786 nt0.21□□□□□ -2.38
SHH3Q04487 YAP6YDR259C 1152 nt0.2□□□□□ -2.38
SHH3Q04487 PAU12YGR294W 363 nt0.2□□□□□ -2.38
SHH3Q04487 AIM29YKR074W 468 nt0.2□□□□□ -2.38
SHH3Q04487 YML108WYML108W 318 nt0.2□□□□□ -2.38
SHH3Q04487 ZEO1YOL109W 342 nt0.2□□□□□ -2.38
SHH3Q04487 RPS30BYOR182C 192 nt0.2□□□□□ -2.38
SHH3Q04487 ULP2YIL031W 3105 nt0.2□□□□□ -2.38
SHH3Q04487 RPS20YHL015W 366 nt0.19□□□□□ -2.38
SHH3Q04487 STE18YJR086W 333 nt0.19□□□□□ -2.38
SHH3Q04487 PET111YMR257C 2403 nt0.19□□□□□ -2.38
SHH3Q04487 YLR287CYLR287C 1068 nt0.18□□□□□ -2.38
SHH3Q04487 YPL185WYPL185W 396 nt0.18□□□□□ -2.38
SHH3Q04487 YPL229WYPL229W 621 nt0.18□□□□□ -2.38
SHH3Q04487 NIP100YPL174C 2607 nt0.17□□□□□ -2.38
SHH3Q04487 BEM3YPL115C 3387 nt0.17□□□□□ -2.38
SHH3Q04487 UTP20YBL004W 7482 nt0.16□□□□□ -2.38
SHH3Q04487 YKL083WYKL083W 615 nt0.16□□□□□ -2.38
SHH3Q04487 VIK1YPL253C 1944 nt0.16□□□□□ -2.38
SHH3Q04487 YOR192C-BYOR192C-B 5313 nt0.15□□□□□ -2.39
SHH3Q04487 ATG31YDR022C 591 nt0.15□□□□□ -2.39
SHH3Q04487 DIE2YGR227W 1578 nt0.15□□□□□ -2.39
SHH3Q04487 PTP2YOR208W 2253 nt0.15□□□□□ -2.39
SHH3Q04487 PRP5YBR237W 2550 nt0.14□□□□□ -2.39
SHH3Q04487 YNL058CYNL058C 951 nt0.14□□□□□ -2.39
SHH3Q04487 YOL013W-AYOL013W-A 192 nt0.14□□□□□ -2.39
SHH3Q04487 YPR160W-AYPR160W-A 81 nt0.14□□□□□ -2.39
SHH3Q04487 YKL145W-AYKL145W-A 93 nt0.13□□□□□ -2.39
SHH3Q04487 SPO21YOL091W 1830 nt0.13□□□□□ -2.39
SHH3Q04487 TRS65YGR166W 1683 nt0.12□□□□□ -2.39
SHH3Q04487 OST4YDL232W 111 nt0.12□□□□□ -2.39
SHH3Q04487 PAA1YDR071C 576 nt0.12□□□□□ -2.39
SHH3Q04487 YNL211CYNL211C 261 nt0.12□□□□□ -2.39
SHH3Q04487 YNL054W-BYNL054W-B 5250 nt0.11□□□□□ -2.39
SHH3Q04487 ESP1YGR098C 4893 nt0.11□□□□□ -2.39
SHH3Q04487 CBS1YDL069C 690 nt0.11□□□□□ -2.39
SHH3Q04487 YGR290WYGR290W 444 nt0.11□□□□□ -2.39
SHH3Q04487 YLR171WYLR171W 390 nt0.1□□□□□ -2.39
SHH3Q04487 YNR025CYNR025C 360 nt0.1□□□□□ -2.39
SHH3Q04487 BI2Q0110 1272 nt0.09□□□□□ -2.4
SHH3Q04487 STF2YGR008C 255 nt0.09□□□□□ -2.4
SHH3Q04487 YHR130CYHR130C 336 nt0.09□□□□□ -2.4
SHH3Q04487 ISF1YMR081C 1017 nt0.09□□□□□ -2.4
SHH3Q04487 YMR321CYMR321C 318 nt0.09□□□□□ -2.4
SHH3Q04487 PRP42YDR235W 1635 nt0.09□□□□□ -2.4
SHH3Q04487 PCF11YDR228C 1881 nt0.08□□□□□ -2.4
SHH3Q04487 SEC8YPR055W 3198 nt0.08□□□□□ -2.4
SHH3Q04487 COX5BYIL111W 456 nt0.08□□□□□ -2.4
SHH3Q04487 YAR047CYAR047C 321 nt0.08□□□□□ -2.4
SHH3Q04487 YPR002C-AYPR002C-A 198 nt0.08□□□□□ -2.4
SHH3Q04487 HAL9YOL089C 3093 nt0.08□□□□□ -2.4
SHH3Q04487 MLP1YKR095W 5628 nt0.08□□□□□ -2.4
SHH3Q04487 YBL100W-BYBL100W-B 5313 nt0.07□□□□□ -2.4
SHH3Q04487 YHL046W-AYHL046W-A 327 nt0.07□□□□□ -2.4
SHH3Q04487 YAL067W-AYAL067W-A 228 nt0.07□□□□□ -2.4
SHH3Q04487 YLR399W-AYLR399W-A 105 nt0.07□□□□□ -2.4
SHH3Q04487 snR54snR54 86 nt0.07□□□□□ -2.4
SHH3Q04487 AI1Q0050 2505 nt0.07□□□□□ -2.4
SHH3Q04487 ORC3YLL004W 1851 nt0.06□□□□□ -2.4
SHH3Q04487 YML007C-AYML007C-A 111 nt0.06□□□□□ -2.4
SHH3Q04487 YNL122CYNL122C 348 nt0.06□□□□□ -2.4
SHH3Q04487 YOR345CYOR345C 351 nt0.06□□□□□ -2.4
SHH3Q04487 IQG1YPL242C 4488 nt0.05□□□□□ -2.4
SHH3Q04487 YDL185C-AYDL185C-A 228 nt0.05□□□□□ -2.4
SHH3Q04487 MYO1YHR023W 5787 nt0.04□□□□□ -2.4
SHH3Q04487 RCO1YMR075W 2055 nt0.04□□□□□ -2.4
SHH3Q04487 YDR426CYDR426C 378 nt0.04□□□□□ -2.4
SHH3Q04487 YGR174W-AYGR174W-A 87 nt0.04□□□□□ -2.4
SHH3Q04487 YLR101CYLR101C 396 nt0.04□□□□□ -2.4
SHH3Q04487 YOR011W-AYOR011W-A 207 nt0.04□□□□□ -2.4
SHH3Q04487 ECL1YGR146C 636 nt0.03□□□□□ -2.4
SHH3Q04487 FYV7YLR068W 456 nt0.03□□□□□ -2.4
SHH3Q04487 TAR1YLR154W-C 375 nt0.03□□□□□ -2.4
SHH3Q04487 HUG1YML058W-A 207 nt0.03□□□□□ -2.4
SHH3Q04487 MRPL50YNR022C 420 nt0.03□□□□□ -2.4
SHH3Q04487 YOR053WYOR053W 342 nt0.03□□□□□ -2.4
SHH3Q04487 BIR1YJR089W 2865 nt0.03□□□□□ -2.41
SHH3Q04487 tF(GAA)BtF(GAA)B 73 nt0.02□□□□□ -2.41
SHH3Q04487 YDR371C-AYDR371C-A 105 nt0.02□□□□□ -2.41
SHH3Q04487 tF(GAA)FtF(GAA)F 73 nt0.02□□□□□ -2.41
Retrieved 100 of 7,029 protein–RNA pairs in 26.4 ms