Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAE1P78406 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.08■□□□□ 0.65
RAE1P78406 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAE1P78406 MOK-225ENST00000522867 1883 ntTSL 5 BASIC19.08■□□□□ 0.65
RAE1P78406 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RAE1P78406 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.08■□□□□ 0.64
RAE1P78406 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAE1P78406 AC133552.2-202ENST00000575694 574 ntBASIC19.08■□□□□ 0.64
RAE1P78406 AL137784.2-201ENST00000607332 1000 ntBASIC19.08■□□□□ 0.64
RAE1P78406 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RAE1P78406 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAE1P78406 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
RAE1P78406 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAE1P78406 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAE1P78406 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAE1P78406 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RAE1P78406 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAE1P78406 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAE1P78406 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAE1P78406 TMEM179-206ENST00000616017 1645 ntBASIC19.07■□□□□ 0.64
RAE1P78406 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAE1P78406 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAE1P78406 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAE1P78406 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAE1P78406 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RAE1P78406 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.07■□□□□ 0.64
RAE1P78406 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RAE1P78406 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.07■□□□□ 0.64
RAE1P78406 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.07■□□□□ 0.64
RAE1P78406 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.07■□□□□ 0.64
RAE1P78406 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.07■□□□□ 0.64
RAE1P78406 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC19.07■□□□□ 0.64
RAE1P78406 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.07■□□□□ 0.64
RAE1P78406 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAE1P78406 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
RAE1P78406 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RAE1P78406 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.06■□□□□ 0.64
RAE1P78406 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAE1P78406 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAE1P78406 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.06■□□□□ 0.64
RAE1P78406 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RAE1P78406 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
RAE1P78406 AL589743.5-201ENST00000616611 1050 ntBASIC19.06■□□□□ 0.64
RAE1P78406 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAE1P78406 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAE1P78406 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RAE1P78406 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.06■□□□□ 0.64
RAE1P78406 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAE1P78406 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.05■□□□□ 0.64
RAE1P78406 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RAE1P78406 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAE1P78406 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAE1P78406 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RAE1P78406 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.05■□□□□ 0.64
RAE1P78406 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAE1P78406 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
RAE1P78406 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAE1P78406 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAE1P78406 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.05■□□□□ 0.64
RAE1P78406 C2orf69P4-201ENST00000565394 541 ntBASIC19.05■□□□□ 0.64
RAE1P78406 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.05■□□□□ 0.64
RAE1P78406 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.05■□□□□ 0.64
RAE1P78406 AL031963.3-201ENST00000606441 850 ntBASIC19.05■□□□□ 0.64
RAE1P78406 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAE1P78406 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAE1P78406 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.05■□□□□ 0.64
RAE1P78406 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAE1P78406 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.05■□□□□ 0.64
RAE1P78406 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
RAE1P78406 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAE1P78406 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAE1P78406 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAE1P78406 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RAE1P78406 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RAE1P78406 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RAE1P78406 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAE1P78406 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAE1P78406 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.04■□□□□ 0.64
RAE1P78406 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAE1P78406 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAE1P78406 AL158211.5-201ENST00000623583 2518 ntBASIC19.04■□□□□ 0.64
RAE1P78406 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAE1P78406 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAE1P78406 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAE1P78406 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.04■□□□□ 0.64
RAE1P78406 CROCCP5-201ENST00000436658 830 ntBASIC19.04■□□□□ 0.64
RAE1P78406 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.04■□□□□ 0.64
RAE1P78406 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.04■□□□□ 0.64
RAE1P78406 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.04■□□□□ 0.64
RAE1P78406 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.04■□□□□ 0.64
RAE1P78406 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
RAE1P78406 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.04■□□□□ 0.64
RAE1P78406 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.04■□□□□ 0.64
RAE1P78406 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.04■□□□□ 0.64
RAE1P78406 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAE1P78406 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.04■□□□□ 0.64
RAE1P78406 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.04■□□□□ 0.64
RAE1P78406 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RAE1P78406 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RAE1P78406 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms