Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 AL390719.1-204ENST00000412397 1219 ntBASIC22.14■■□□□ 1.13
PEX3P56589 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.14■■□□□ 1.13
PEX3P56589 UNC93B4-201ENST00000505679 747 ntBASIC22.14■■□□□ 1.13
PEX3P56589 AL031963.3-201ENST00000606441 850 ntBASIC22.14■■□□□ 1.13
PEX3P56589 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PEX3P56589 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC22.14■■□□□ 1.13
PEX3P56589 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PEX3P56589 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC22.14■■□□□ 1.13
PEX3P56589 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
PEX3P56589 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PEX3P56589 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
PEX3P56589 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.14■■□□□ 1.13
PEX3P56589 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
PEX3P56589 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PEX3P56589 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PEX3P56589 ESRRAP1-201ENST00000400596 1257 ntBASIC22.13■■□□□ 1.13
PEX3P56589 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.13■■□□□ 1.13
PEX3P56589 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
PEX3P56589 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PEX3P56589 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
PEX3P56589 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PEX3P56589 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PEX3P56589 AP003097.1-201ENST00000530657 1135 ntBASIC22.13■■□□□ 1.13
PEX3P56589 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PEX3P56589 AC008403.3-201ENST00000598924 454 ntBASIC22.13■■□□□ 1.13
PEX3P56589 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC22.13■■□□□ 1.13
PEX3P56589 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PEX3P56589 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PEX3P56589 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.13■■□□□ 1.13
PEX3P56589 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PEX3P56589 KRT8P20-201ENST00000423953 1409 ntBASIC22.13■■□□□ 1.13
PEX3P56589 KRT8P17-201ENST00000453110 1448 ntBASIC22.13■■□□□ 1.13
PEX3P56589 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PEX3P56589 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PEX3P56589 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC22.12■■□□□ 1.13
PEX3P56589 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PEX3P56589 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.12■■□□□ 1.13
PEX3P56589 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC22.12■■□□□ 1.13
PEX3P56589 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
PEX3P56589 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PEX3P56589 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.12■■□□□ 1.13
PEX3P56589 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PEX3P56589 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.12■■□□□ 1.13
PEX3P56589 RER1-204ENST00000378518 522 ntTSL 3 BASIC22.12■■□□□ 1.13
PEX3P56589 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PEX3P56589 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PEX3P56589 AC026366.1-201ENST00000488803 879 ntBASIC22.12■■□□□ 1.13
PEX3P56589 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PEX3P56589 MMAB-206ENST00000540016 945 ntTSL 3 BASIC22.12■■□□□ 1.13
PEX3P56589 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.12■■□□□ 1.13
PEX3P56589 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC22.12■■□□□ 1.13
PEX3P56589 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PEX3P56589 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PEX3P56589 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PEX3P56589 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PEX3P56589 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.12■■□□□ 1.13
PEX3P56589 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PEX3P56589 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.12■■□□□ 1.13
PEX3P56589 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.12■■□□□ 1.13
PEX3P56589 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC22.12■■□□□ 1.13
PEX3P56589 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PEX3P56589 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PEX3P56589 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC22.11■■□□□ 1.13
PEX3P56589 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PEX3P56589 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PEX3P56589 HLA-G-202ENST00000376815 851 ntBASIC22.11■■□□□ 1.13
PEX3P56589 HLA-G-203ENST00000376818 1127 ntBASIC22.11■■□□□ 1.13
PEX3P56589 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.11■■□□□ 1.13
PEX3P56589 POU5F1P3-201ENST00000428824 1078 ntBASIC22.11■■□□□ 1.13
PEX3P56589 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PEX3P56589 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC22.11■■□□□ 1.13
PEX3P56589 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.11■■□□□ 1.13
PEX3P56589 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PEX3P56589 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC22.11■■□□□ 1.13
PEX3P56589 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC22.11■■□□□ 1.13
PEX3P56589 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.11■■□□□ 1.13
PEX3P56589 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC22.11■■□□□ 1.13
PEX3P56589 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PEX3P56589 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.11■■□□□ 1.13
PEX3P56589 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PEX3P56589 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PEX3P56589 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PEX3P56589 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PEX3P56589 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC22.1■■□□□ 1.13
PEX3P56589 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
PEX3P56589 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PEX3P56589 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PEX3P56589 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PEX3P56589 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PEX3P56589 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
PEX3P56589 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PEX3P56589 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PEX3P56589 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PEX3P56589 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
PEX3P56589 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.1■■□□□ 1.13
PEX3P56589 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC22.1■■□□□ 1.13
PEX3P56589 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC22.1■■□□□ 1.13
PEX3P56589 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC22.1■■□□□ 1.13
PEX3P56589 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC22.1■■□□□ 1.13
PEX3P56589 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms