Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 AC069236.1-201ENST00000604339 616 ntBASIC20.12■□□□□ 0.81
ARCN1P48444 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARCN1P48444 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARCN1P48444 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARCN1P48444 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ARCN1P48444 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.12■□□□□ 0.81
ARCN1P48444 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
ARCN1P48444 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.12■□□□□ 0.81
ARCN1P48444 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ARCN1P48444 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.12■□□□□ 0.81
ARCN1P48444 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ARCN1P48444 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARCN1P48444 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARCN1P48444 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARCN1P48444 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARCN1P48444 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARCN1P48444 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ARCN1P48444 AL355472.2-201ENST00000422958 438 ntBASIC20.11■□□□□ 0.81
ARCN1P48444 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.11■□□□□ 0.81
ARCN1P48444 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
ARCN1P48444 OR10C1-204ENST00000622521 1039 ntBASIC20.11■□□□□ 0.81
ARCN1P48444 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ARCN1P48444 AC125437.2-201ENST00000625180 2167 ntBASIC20.11■□□□□ 0.81
ARCN1P48444 AC010980.2-201ENST00000587099 1412 ntBASIC20.1■□□□□ 0.81
ARCN1P48444 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ARCN1P48444 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ARCN1P48444 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.1■□□□□ 0.81
ARCN1P48444 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.1■□□□□ 0.81
ARCN1P48444 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.1■□□□□ 0.81
ARCN1P48444 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.1■□□□□ 0.81
ARCN1P48444 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
ARCN1P48444 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ARCN1P48444 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ARCN1P48444 AC093787.1-201ENST00000450396 207 ntBASIC20.1■□□□□ 0.81
ARCN1P48444 AF201337.1-201ENST00000520239 748 ntBASIC20.1■□□□□ 0.81
ARCN1P48444 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.1■□□□□ 0.81
ARCN1P48444 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
ARCN1P48444 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.1■□□□□ 0.81
ARCN1P48444 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.1■□□□□ 0.81
ARCN1P48444 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ARCN1P48444 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.1■□□□□ 0.81
ARCN1P48444 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.1■□□□□ 0.81
ARCN1P48444 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
ARCN1P48444 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ARCN1P48444 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.1■□□□□ 0.81
ARCN1P48444 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ARCN1P48444 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ARCN1P48444 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ARCN1P48444 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ARCN1P48444 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
ARCN1P48444 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ARCN1P48444 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ARCN1P48444 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ARCN1P48444 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ARCN1P48444 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.09■□□□□ 0.81
ARCN1P48444 GUSBP6-202ENST00000438529 1198 ntBASIC20.09■□□□□ 0.81
ARCN1P48444 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.09■□□□□ 0.81
ARCN1P48444 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC20.09■□□□□ 0.81
ARCN1P48444 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.09■□□□□ 0.81
ARCN1P48444 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.09■□□□□ 0.81
ARCN1P48444 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.09■□□□□ 0.81
ARCN1P48444 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.09■□□□□ 0.81
ARCN1P48444 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.09■□□□□ 0.81
ARCN1P48444 AC008694.1-202ENST00000636953 945 ntBASIC20.09■□□□□ 0.81
ARCN1P48444 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ARCN1P48444 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ARCN1P48444 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ARCN1P48444 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ARCN1P48444 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
ARCN1P48444 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.09■□□□□ 0.81
ARCN1P48444 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
ARCN1P48444 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ARCN1P48444 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ARCN1P48444 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARCN1P48444 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.08■□□□□ 0.81
ARCN1P48444 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARCN1P48444 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARCN1P48444 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ARCN1P48444 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.08■□□□□ 0.81
ARCN1P48444 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARCN1P48444 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARCN1P48444 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARCN1P48444 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARCN1P48444 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ARCN1P48444 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ARCN1P48444 AL512625.2-201ENST00000417533 625 ntBASIC20.08■□□□□ 0.81
ARCN1P48444 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
ARCN1P48444 TSPY6P-201ENST00000448518 926 ntBASIC20.08■□□□□ 0.81
ARCN1P48444 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.08■□□□□ 0.81
ARCN1P48444 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
ARCN1P48444 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ARCN1P48444 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ARCN1P48444 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ARCN1P48444 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.08■□□□□ 0.8
ARCN1P48444 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ARCN1P48444 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ARCN1P48444 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.08■□□□□ 0.8
ARCN1P48444 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.07■□□□□ 0.8
ARCN1P48444 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARCN1P48444 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms