Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Xcl1P47993 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Xcl1P47993 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC11.39□□□□□ -0.59
Xcl1P47993 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Xcl1P47993 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Xcl1P47993 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Xcl1P47993 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC11.38□□□□□ -0.59
Xcl1P47993 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Xcl1P47993 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Xcl1P47993 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Xcl1P47993 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Xcl1P47993 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Xcl1P47993 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Xcl1P47993 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Xcl1P47993 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Xcl1P47993 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Xcl1P47993 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Xcl1P47993 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Xcl1P47993 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC11.38□□□□□ -0.59
Xcl1P47993 Gm9939-201ENSMUST00000067161 1154 ntBASIC11.38□□□□□ -0.59
Xcl1P47993 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Xcl1P47993 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Xcl1P47993 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Xcl1P47993 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Xcl1P47993 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Xcl1P47993 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Xcl1P47993 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Xcl1P47993 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Xcl1P47993 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Xcl1P47993 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Xcl1P47993 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC11.37□□□□□ -0.59
Xcl1P47993 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Xcl1P47993 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Xcl1P47993 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC11.37□□□□□ -0.59
Xcl1P47993 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Xcl1P47993 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Xcl1P47993 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
Xcl1P47993 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
Xcl1P47993 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Xcl1P47993 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Xcl1P47993 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Xcl1P47993 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Xcl1P47993 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xcl1P47993 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Xcl1P47993 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Xcl1P47993 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xcl1P47993 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xcl1P47993 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xcl1P47993 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.36□□□□□ -0.59
Xcl1P47993 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Xcl1P47993 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Xcl1P47993 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Xcl1P47993 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Xcl1P47993 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xcl1P47993 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xcl1P47993 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xcl1P47993 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xcl1P47993 Gm43530-201ENSMUST00000195920 274 ntBASIC11.36□□□□□ -0.59
Xcl1P47993 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xcl1P47993 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xcl1P47993 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xcl1P47993 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xcl1P47993 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xcl1P47993 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Xcl1P47993 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xcl1P47993 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xcl1P47993 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Xcl1P47993 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Xcl1P47993 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.35□□□□□ -0.59
Xcl1P47993 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Xcl1P47993 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms