Protein–RNA interactions for Protein: P47093

LSM8, U6 snRNA-associated Sm-like protein LSm8, yeastyeast

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM8P47093 YHR052W-AYHR052W-A 195 nt-0.23□□□□□ -2.45
LSM8P47093 YHR054W-AYHR054W-A 195 nt-0.23□□□□□ -2.45
LSM8P47093 YJR087WYJR087W 351 nt-0.23□□□□□ -2.45
LSM8P47093 YOL029CYOL029C 606 nt-0.23□□□□□ -2.45
LSM8P47093 YER175W-AYER175W-A 165 nt-0.24□□□□□ -2.45
LSM8P47093 YIL066W-AYIL066W-A 444 nt-0.24□□□□□ -2.45
LSM8P47093 YIR044CYIR044C 186 nt-0.24□□□□□ -2.45
LSM8P47093 YAL067W-AYAL067W-A 228 nt-0.24□□□□□ -2.45
LSM8P47093 YOL019W-AYOL019W-A 153 nt-0.24□□□□□ -2.45
LSM8P47093 PAA1YDR071C 576 nt-0.25□□□□□ -2.45
LSM8P47093 NFU1YKL040C 771 nt-0.25□□□□□ -2.45
LSM8P47093 YKL202WYKL202W 582 nt-0.25□□□□□ -2.45
LSM8P47093 PBI2YNL015W 228 nt-0.25□□□□□ -2.45
LSM8P47093 YOR345CYOR345C 351 nt-0.25□□□□□ -2.45
LSM8P47093 STE5YDR103W 2754 nt-0.25□□□□□ -2.45
LSM8P47093 SNU56YDR240C 1479 nt-0.26□□□□□ -2.45
LSM8P47093 YNL146WYNL146W 303 nt-0.26□□□□□ -2.45
LSM8P47093 DCP1YOL149W 696 nt-0.26□□□□□ -2.45
LSM8P47093 IPP1YBR011C 864 nt-0.26□□□□□ -2.45
LSM8P47093 SLX9YGR081C 633 nt-0.27□□□□□ -2.45
LSM8P47093 MAM33YIL070C 801 nt-0.27□□□□□ -2.45
LSM8P47093 YLR399W-AYLR399W-A 105 nt-0.27□□□□□ -2.45
LSM8P47093 YML108WYML108W 318 nt-0.27□□□□□ -2.45
LSM8P47093 SPO21YOL091W 1830 nt-0.27□□□□□ -2.45
LSM8P47093 YGR025WYGR025W 303 nt-0.28□□□□□ -2.45
LSM8P47093 YOR186C-AYOR186C-A 210 nt-0.28□□□□□ -2.45
LSM8P47093 SOV1YMR066W 2697 nt-0.29□□□□□ -2.46
LSM8P47093 YCR100CYCR100C 951 nt-0.3□□□□□ -2.46
LSM8P47093 YKL145W-AYKL145W-A 93 nt-0.3□□□□□ -2.46
LSM8P47093 YNL211CYNL211C 261 nt-0.3□□□□□ -2.46
LSM8P47093 snR51snR51 107 nt-0.3□□□□□ -2.46
LSM8P47093 COY1YKL179C 2040 nt-0.3□□□□□ -2.46
LSM8P47093 NNF2YGR089W 2811 nt-0.31□□□□□ -2.46
LSM8P47093 YIL029CYIL029C 429 nt-0.31□□□□□ -2.46
LSM8P47093 YJR011CYJR011C 786 nt-0.31□□□□□ -2.46
LSM8P47093 YKL044WYKL044W 321 nt-0.31□□□□□ -2.46
LSM8P47093 MRPS8YMR158W 468 nt-0.31□□□□□ -2.46
LSM8P47093 YHL046W-AYHL046W-A 327 nt-0.32□□□□□ -2.46
LSM8P47093 YPL182CYPL182C 384 nt-0.32□□□□□ -2.46
LSM8P47093 YLR171WYLR171W 390 nt-0.33□□□□□ -2.46
LSM8P47093 YCR001WYCR001W 315 nt-0.34□□□□□ -2.46
LSM8P47093 TIM13YGR181W 318 nt-0.34□□□□□ -2.46
LSM8P47093 YKL023C-AYKL023C-A 228 nt-0.34□□□□□ -2.46
LSM8P47093 YOL038C-AYOL038C-A 96 nt-0.34□□□□□ -2.46
LSM8P47093 snR45snR45 172 nt-0.34□□□□□ -2.46
LSM8P47093 THO2YNL139C 4794 nt-0.34□□□□□ -2.46
LSM8P47093 PTP2YOR208W 2253 nt-0.34□□□□□ -2.46
LSM8P47093 NIP1YMR309C 2439 nt-0.35□□□□□ -2.46
LSM8P47093 YKU70YMR284W 1809 nt-0.35□□□□□ -2.47
LSM8P47093 SDH7YDR511W 402 nt-0.35□□□□□ -2.47
LSM8P47093 RPS20YHL015W 366 nt-0.35□□□□□ -2.47
LSM8P47093 tN(GUU)QtN(GUU)Q 71 nt-0.36□□□□□ -2.47
LSM8P47093 YKL136WYKL136W 399 nt-0.36□□□□□ -2.47
LSM8P47093 WIP1YDR374W-A 270 nt-0.38□□□□□ -2.47
LSM8P47093 ANS1YHR126C 480 nt-0.38□□□□□ -2.47
LSM8P47093 YAL066WYAL066W 309 nt-0.38□□□□□ -2.47
LSM8P47093 YDL185C-AYDL185C-A 228 nt-0.39□□□□□ -2.47
LSM8P47093 snR8snR8 190 nt-0.39□□□□□ -2.47
LSM8P47093 YDR210WYDR210W 228 nt-0.39□□□□□ -2.47
LSM8P47093 YOR029WYOR029W 336 nt-0.4□□□□□ -2.47
LSM8P47093 TSC3YBR058C-A 243 nt-0.4□□□□□ -2.47
LSM8P47093 NIP100YPL174C 2607 nt-0.4□□□□□ -2.47
LSM8P47093 HMLALPHA2YCL067C 633 nt-0.41□□□□□ -2.48
LSM8P47093 MATALPHA2YCR039C 633 nt-0.41□□□□□ -2.48
LSM8P47093 ATG31YDR022C 591 nt-0.42□□□□□ -2.48
LSM8P47093 YJR141WYJR141W 1044 nt-0.42□□□□□ -2.48
LSM8P47093 SVS1YPL163C 783 nt-0.42□□□□□ -2.48
LSM8P47093 BER1YLR412W 825 nt-0.43□□□□□ -2.48
LSM8P47093 BUL2YML111W 2763 nt-0.43□□□□□ -2.48
LSM8P47093 snR128snR128 126 nt-0.44□□□□□ -2.48
LSM8P47093 RPF1YHR088W 888 nt-0.45□□□□□ -2.48
LSM8P47093 SEM1YDR363W-A 270 nt-0.46□□□□□ -2.48
LSM8P47093 YEL073CYEL073C 324 nt-0.46□□□□□ -2.48
LSM8P47093 YHL041WYHL041W 450 nt-0.46□□□□□ -2.48
LSM8P47093 YHR131W-AYHR131W-A 246 nt-0.46□□□□□ -2.48
LSM8P47093 YJL020W-AYJL020W-A 258 nt-0.46□□□□□ -2.48
LSM8P47093 YER078W-AYER078W-A 165 nt-0.47□□□□□ -2.48
LSM8P47093 YAR053WYAR053W 297 nt-0.47□□□□□ -2.48
LSM8P47093 SGF11YPL047W 300 nt-0.47□□□□□ -2.48
LSM8P47093 YDL016CYDL016C 303 nt-0.48□□□□□ -2.49
LSM8P47093 MPC1YGL080W 393 nt-0.48□□□□□ -2.49
LSM8P47093 YNL319WYNL319W 441 nt-0.48□□□□□ -2.49
LSM8P47093 YOR011W-AYOR011W-A 207 nt-0.48□□□□□ -2.49
LSM8P47093 TAR1YLR154W-C 375 nt-0.49□□□□□ -2.49
LSM8P47093 YNL058CYNL058C 951 nt-0.49□□□□□ -2.49
LSM8P47093 YCR018C-AYCR018C-A 255 nt-0.5□□□□□ -2.49
LSM8P47093 YDL011CYDL011C 324 nt-0.5□□□□□ -2.49
LSM8P47093 YMR307C-AYMR307C-A 195 nt-0.5□□□□□ -2.49
LSM8P47093 GRX5YPL059W 453 nt-0.5□□□□□ -2.49
LSM8P47093 SBH2YER019C-A 267 nt-0.51□□□□□ -2.49
LSM8P47093 YFR009W-AYFR009W-A 258 nt-0.51□□□□□ -2.49
LSM8P47093 YLL006W-AYLL006W-A 177 nt-0.51□□□□□ -2.49
LSM8P47093 YPL225WYPL225W 441 nt-0.52□□□□□ -2.49
LSM8P47093 YBL071CYBL071C 309 nt-0.53□□□□□ -2.49
LSM8P47093 RPS30BYOR182C 192 nt-0.53□□□□□ -2.49
LSM8P47093 YLR269CYLR269C 351 nt-0.54□□□□□ -2.5
LSM8P47093 YPL229WYPL229W 621 nt-0.54□□□□□ -2.5
LSM8P47093 YPR092WYPR092W 306 nt-0.54□□□□□ -2.5
LSM8P47093 TFB5YDR079C-A 219 nt-0.55□□□□□ -2.5
LSM8P47093 YCR022CYCR022C 345 nt-0.56□□□□□ -2.5
Retrieved 100 of 7,029 protein–RNA pairs in 42.1 ms