Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 UNC93B5-201ENST00000530315 699 ntBASIC18.5■□□□□ 0.55
ABCD3P28288 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.5■□□□□ 0.55
ABCD3P28288 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ABCD3P28288 AL031963.3-201ENST00000606441 850 ntBASIC18.5■□□□□ 0.55
ABCD3P28288 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.5■□□□□ 0.55
ABCD3P28288 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ABCD3P28288 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCD3P28288 AL512408.1-201ENST00000569378 2000 ntBASIC18.5■□□□□ 0.55
ABCD3P28288 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ABCD3P28288 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCD3P28288 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.5■□□□□ 0.55
ABCD3P28288 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.5■□□□□ 0.55
ABCD3P28288 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ABCD3P28288 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCD3P28288 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCD3P28288 KRT8P20-201ENST00000423953 1409 ntBASIC18.49■□□□□ 0.55
ABCD3P28288 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCD3P28288 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ABCD3P28288 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.49■□□□□ 0.55
ABCD3P28288 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCD3P28288 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.49■□□□□ 0.55
ABCD3P28288 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.49■□□□□ 0.55
ABCD3P28288 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ABCD3P28288 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCD3P28288 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCD3P28288 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.49■□□□□ 0.55
ABCD3P28288 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ABCD3P28288 AL390719.1-204ENST00000412397 1219 ntBASIC18.49■□□□□ 0.55
ABCD3P28288 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.49■□□□□ 0.55
ABCD3P28288 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ABCD3P28288 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
ABCD3P28288 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
ABCD3P28288 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCD3P28288 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ABCD3P28288 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCD3P28288 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
ABCD3P28288 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.49■□□□□ 0.55
ABCD3P28288 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ABCD3P28288 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.49■□□□□ 0.55
ABCD3P28288 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ABCD3P28288 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ABCD3P28288 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
ABCD3P28288 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.48■□□□□ 0.55
ABCD3P28288 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.48■□□□□ 0.55
ABCD3P28288 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.48■□□□□ 0.55
ABCD3P28288 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.48■□□□□ 0.55
ABCD3P28288 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD3P28288 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD3P28288 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.48■□□□□ 0.55
ABCD3P28288 HLA-G-202ENST00000376815 851 ntBASIC18.48■□□□□ 0.55
ABCD3P28288 HLA-G-203ENST00000376818 1127 ntBASIC18.48■□□□□ 0.55
ABCD3P28288 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.48■□□□□ 0.55
ABCD3P28288 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.48■□□□□ 0.55
ABCD3P28288 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.48■□□□□ 0.55
ABCD3P28288 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
ABCD3P28288 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ABCD3P28288 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
ABCD3P28288 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD3P28288 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
ABCD3P28288 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD3P28288 KRT8P17-201ENST00000453110 1448 ntBASIC18.48■□□□□ 0.55
ABCD3P28288 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ABCD3P28288 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD3P28288 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.47■□□□□ 0.55
ABCD3P28288 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.47■□□□□ 0.55
ABCD3P28288 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.47■□□□□ 0.55
ABCD3P28288 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD3P28288 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.47■□□□□ 0.55
ABCD3P28288 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.47■□□□□ 0.55
ABCD3P28288 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.47■□□□□ 0.55
ABCD3P28288 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD3P28288 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD3P28288 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
ABCD3P28288 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD3P28288 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.47■□□□□ 0.55
ABCD3P28288 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD3P28288 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.47■□□□□ 0.55
ABCD3P28288 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.47■□□□□ 0.55
ABCD3P28288 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.47■□□□□ 0.55
ABCD3P28288 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD3P28288 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD3P28288 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD3P28288 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
ABCD3P28288 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD3P28288 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.47■□□□□ 0.55
ABCD3P28288 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
ABCD3P28288 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.46■□□□□ 0.55
ABCD3P28288 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ABCD3P28288 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.46■□□□□ 0.55
ABCD3P28288 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.46■□□□□ 0.55
ABCD3P28288 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ABCD3P28288 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ABCD3P28288 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.46■□□□□ 0.55
ABCD3P28288 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.46■□□□□ 0.55
ABCD3P28288 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ABCD3P28288 AL162377.1-201ENST00000618844 1793 ntBASIC18.46■□□□□ 0.55
ABCD3P28288 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.46■□□□□ 0.55
ABCD3P28288 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.46■□□□□ 0.55
ABCD3P28288 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.46■□□□□ 0.55
ABCD3P28288 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms