Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.25■□□□□ 0.67
PTX3P26022 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.25■□□□□ 0.67
PTX3P26022 AC105036.2-201ENST00000569468 176 ntBASIC19.25■□□□□ 0.67
PTX3P26022 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.25■□□□□ 0.67
PTX3P26022 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.25■□□□□ 0.67
PTX3P26022 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.25■□□□□ 0.67
PTX3P26022 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTX3P26022 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PTX3P26022 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.25■□□□□ 0.67
PTX3P26022 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.24■□□□□ 0.67
PTX3P26022 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTX3P26022 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTX3P26022 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTX3P26022 MIR663A-201ENST00000385250 93 ntBASIC19.24■□□□□ 0.67
PTX3P26022 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PTX3P26022 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTX3P26022 CROCCP5-201ENST00000436658 830 ntBASIC19.24■□□□□ 0.67
PTX3P26022 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.24■□□□□ 0.67
PTX3P26022 AL050303.2-201ENST00000619798 666 ntBASIC19.24■□□□□ 0.67
PTX3P26022 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTX3P26022 MKRN4P-201ENST00000444706 1521 ntBASIC19.24■□□□□ 0.67
PTX3P26022 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.24■□□□□ 0.67
PTX3P26022 AL391422.3-201ENST00000603791 2761 ntBASIC19.24■□□□□ 0.67
PTX3P26022 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC19.24■□□□□ 0.67
PTX3P26022 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTX3P26022 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PTX3P26022 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTX3P26022 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PTX3P26022 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
PTX3P26022 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.24■□□□□ 0.67
PTX3P26022 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.23■□□□□ 0.67
PTX3P26022 LSM12P1-201ENST00000411836 588 ntBASIC19.23■□□□□ 0.67
PTX3P26022 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.23■□□□□ 0.67
PTX3P26022 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTX3P26022 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PTX3P26022 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PTX3P26022 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.23■□□□□ 0.67
PTX3P26022 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
PTX3P26022 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
PTX3P26022 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTX3P26022 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTX3P26022 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTX3P26022 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
PTX3P26022 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PTX3P26022 KRT17P1-201ENST00000399211 1546 ntBASIC19.22■□□□□ 0.67
PTX3P26022 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTX3P26022 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PTX3P26022 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.22■□□□□ 0.67
PTX3P26022 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.22■□□□□ 0.67
PTX3P26022 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.22■□□□□ 0.67
PTX3P26022 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.22■□□□□ 0.67
PTX3P26022 C2orf69P4-201ENST00000565394 541 ntBASIC19.22■□□□□ 0.67
PTX3P26022 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.22■□□□□ 0.67
PTX3P26022 AC092666.2-201ENST00000613287 246 ntBASIC19.22■□□□□ 0.67
PTX3P26022 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.22■□□□□ 0.67
PTX3P26022 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.22■□□□□ 0.67
PTX3P26022 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTX3P26022 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTX3P26022 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTX3P26022 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PTX3P26022 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PTX3P26022 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
PTX3P26022 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTX3P26022 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PTX3P26022 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
PTX3P26022 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTX3P26022 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.21■□□□□ 0.67
PTX3P26022 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTX3P26022 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
PTX3P26022 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.21■□□□□ 0.67
PTX3P26022 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTX3P26022 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTX3P26022 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC19.21■□□□□ 0.67
PTX3P26022 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
PTX3P26022 AC006970.2-201ENST00000450065 779 ntBASIC19.21■□□□□ 0.67
PTX3P26022 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC19.21■□□□□ 0.67
PTX3P26022 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.21■□□□□ 0.67
PTX3P26022 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTX3P26022 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.21■□□□□ 0.67
PTX3P26022 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PTX3P26022 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTX3P26022 AC112907.3-201ENST00000577781 2400 ntBASIC19.21■□□□□ 0.67
PTX3P26022 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PTX3P26022 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
PTX3P26022 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTX3P26022 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTX3P26022 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PTX3P26022 KRT8P17-201ENST00000453110 1448 ntBASIC19.2■□□□□ 0.66
PTX3P26022 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PTX3P26022 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
PTX3P26022 AC083906.2-201ENST00000511578 360 ntBASIC19.2■□□□□ 0.66
PTX3P26022 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.2■□□□□ 0.66
PTX3P26022 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.2■□□□□ 0.66
PTX3P26022 AL121832.2-201ENST00000610979 668 ntBASIC19.2■□□□□ 0.66
PTX3P26022 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.2■□□□□ 0.66
PTX3P26022 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.2■□□□□ 0.66
PTX3P26022 PTBP1P-201ENST00000554374 1601 ntBASIC19.2■□□□□ 0.66
PTX3P26022 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
PTX3P26022 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
PTX3P26022 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms