Protein–RNA interactions for Protein: P21576

VPS1, Vacuolar protein sorting-associated protein 1, yeastyeast

Known RBP Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS1P21576 CSN9YDR179C 489 nt0.93□□□□□ -2.26
VPS1P21576 STF2YGR008C 255 nt0.93□□□□□ -2.26
VPS1P21576 YGR174W-AYGR174W-A 87 nt0.93□□□□□ -2.26
VPS1P21576 YOR121CYOR121C 306 nt0.93□□□□□ -2.26
VPS1P21576 RPB10YOR210W 213 nt0.93□□□□□ -2.26
VPS1P21576 YBR221W-AYBR221W-A 105 nt0.93□□□□□ -2.26
VPS1P21576 INP2YMR163C 2118 nt0.92□□□□□ -2.26
VPS1P21576 RAD34YDR314C 2079 nt0.92□□□□□ -2.26
VPS1P21576 OST1YJL002C 1431 nt0.92□□□□□ -2.26
VPS1P21576 RPL38YLR325C 237 nt0.92□□□□□ -2.26
VPS1P21576 YBL008W-AYBL008W-A 240 nt0.92□□□□□ -2.26
VPS1P21576 HUG1YML058W-A 207 nt0.92□□□□□ -2.26
VPS1P21576 COG4YPR105C 2586 nt0.91□□□□□ -2.26
VPS1P21576 YFL019CYFL019C 354 nt0.91□□□□□ -2.26
VPS1P21576 IRC23YOR044W 474 nt0.91□□□□□ -2.26
VPS1P21576 SLI15YBR156C 2097 nt0.9□□□□□ -2.26
VPS1P21576 AIM44YPL158C 2277 nt0.9□□□□□ -2.27
VPS1P21576 STO1YMR125W 2586 nt0.9□□□□□ -2.27
VPS1P21576 NHP2YDL208W 471 nt0.89□□□□□ -2.27
VPS1P21576 YDR426CYDR426C 378 nt0.89□□□□□ -2.27
VPS1P21576 YIL142C-AYIL142C-A 333 nt0.89□□□□□ -2.27
VPS1P21576 YJR011CYJR011C 786 nt0.89□□□□□ -2.27
VPS1P21576 YNL058CYNL058C 951 nt0.89□□□□□ -2.27
VPS1P21576 PAN2YGL094C 3348 nt0.89□□□□□ -2.27
VPS1P21576 YDR157WYDR157W 402 nt0.88□□□□□ -2.27
VPS1P21576 YML007C-AYML007C-A 111 nt0.88□□□□□ -2.27
VPS1P21576 YOR108C-AYOR108C-A 210 nt0.88□□□□□ -2.27
VPS1P21576 YPR002C-AYPR002C-A 198 nt0.88□□□□□ -2.27
VPS1P21576 YBR200W-AYBR200W-A 165 nt0.88□□□□□ -2.27
VPS1P21576 PDE2YOR360C 1581 nt0.87□□□□□ -2.27
VPS1P21576 tW(UCA)QtW(UCA)Q 74 nt0.87□□□□□ -2.27
VPS1P21576 FIG4YNL325C 2640 nt0.87□□□□□ -2.27
VPS1P21576 MAM33YIL070C 801 nt0.86□□□□□ -2.27
VPS1P21576 YMR290W-AYMR290W-A 348 nt0.86□□□□□ -2.27
VPS1P21576 YDL206WYDL206W 2289 nt0.86□□□□□ -2.27
VPS1P21576 SEC1YDR164C 2175 nt0.85□□□□□ -2.27
VPS1P21576 YDR521WYDR521W 336 nt0.85□□□□□ -2.27
VPS1P21576 INA22YIR024C 651 nt0.85□□□□□ -2.27
VPS1P21576 PAM16YJL104W 450 nt0.85□□□□□ -2.27
VPS1P21576 MMS4YBR098W 2076 nt0.85□□□□□ -2.27
VPS1P21576 YHL042WYHL042W 453 nt0.84□□□□□ -2.27
VPS1P21576 RPS30BYOR182C 192 nt0.84□□□□□ -2.27
VPS1P21576 YBR206WYBR206W 324 nt0.84□□□□□ -2.27
VPS1P21576 YAR053WYAR053W 297 nt0.83□□□□□ -2.28
VPS1P21576 RIM20YOR275C 1986 nt0.83□□□□□ -2.28
VPS1P21576 RPL35AYDL191W 363 nt0.82□□□□□ -2.28
VPS1P21576 YGR035CYGR035C 351 nt0.82□□□□□ -2.28
VPS1P21576 CMC4YMR194C-B 222 nt0.82□□□□□ -2.28
VPS1P21576 PKH2YOL100W 3246 nt0.81□□□□□ -2.28
VPS1P21576 YDL196WYDL196W 330 nt0.81□□□□□ -2.28
VPS1P21576 tT(AGU)BtT(AGU)B 73 nt0.81□□□□□ -2.28
VPS1P21576 tT(AGU)CtT(AGU)C 73 nt0.81□□□□□ -2.28
VPS1P21576 tT(AGU)DtT(AGU)D 73 nt0.81□□□□□ -2.28
VPS1P21576 tT(AGU)HtT(AGU)H 73 nt0.81□□□□□ -2.28
VPS1P21576 tT(AGU)I1tT(AGU)I1 73 nt0.81□□□□□ -2.28
VPS1P21576 tT(AGU)I2tT(AGU)I2 73 nt0.81□□□□□ -2.28
VPS1P21576 tT(AGU)JtT(AGU)J 73 nt0.81□□□□□ -2.28
VPS1P21576 tT(AGU)N1tT(AGU)N1 73 nt0.81□□□□□ -2.28
VPS1P21576 tT(AGU)N2tT(AGU)N2 73 nt0.81□□□□□ -2.28
VPS1P21576 tT(AGU)O1tT(AGU)O1 73 nt0.81□□□□□ -2.28
VPS1P21576 tT(AGU)O2tT(AGU)O2 73 nt0.81□□□□□ -2.28
VPS1P21576 YBR064WYBR064W 429 nt0.81□□□□□ -2.28
VPS1P21576 GPG1YGL121C 381 nt0.79□□□□□ -2.28
VPS1P21576 YIR044CYIR044C 186 nt0.79□□□□□ -2.28
VPS1P21576 PCC1YKR095W-A 267 nt0.79□□□□□ -2.28
VPS1P21576 YLR334CYLR334C 381 nt0.79□□□□□ -2.28
VPS1P21576 YPR012WYPR012W 255 nt0.79□□□□□ -2.28
VPS1P21576 YHR007C-AYHR007C-A 216 nt0.78□□□□□ -2.28
VPS1P21576 YPR016W-AYPR016W-A 261 nt0.78□□□□□ -2.28
VPS1P21576 WAR1YML076C 2835 nt0.78□□□□□ -2.29
VPS1P21576 YOR029WYOR029W 336 nt0.77□□□□□ -2.29
VPS1P21576 RKR1YMR247C 4689 nt0.77□□□□□ -2.29
VPS1P21576 YLL007CYLL007C 1998 nt0.77□□□□□ -2.29
VPS1P21576 YCK3YER123W 1575 nt0.76□□□□□ -2.29
VPS1P21576 YJL120WYJL120W 324 nt0.76□□□□□ -2.29
VPS1P21576 CUL3YGR003W 2235 nt0.76□□□□□ -2.29
VPS1P21576 ASE1YOR058C 2658 nt0.75□□□□□ -2.29
VPS1P21576 YAR029WYAR029W 225 nt0.75□□□□□ -2.29
VPS1P21576 HTB2YBL002W 396 nt0.74□□□□□ -2.29
VPS1P21576 MCM10YIL150C 1716 nt0.74□□□□□ -2.29
VPS1P21576 GEA2YEL022W 4380 nt0.73□□□□□ -2.29
VPS1P21576 ALG13YGL047W 609 nt0.73□□□□□ -2.29
VPS1P21576 BFR2YDR299W 1605 nt0.72□□□□□ -2.29
VPS1P21576 SSS1YDR086C 243 nt0.72□□□□□ -2.29
VPS1P21576 ISD11YER048W-A 285 nt0.72□□□□□ -2.29
VPS1P21576 YMR272W-AYMR272W-A 114 nt0.72□□□□□ -2.29
VPS1P21576 BIL1YOR304C-A 231 nt0.72□□□□□ -2.29
VPS1P21576 YPR170W-AYPR170W-A 186 nt0.72□□□□□ -2.29
VPS1P21576 SPO21YOL091W 1830 nt0.72□□□□□ -2.29
VPS1P21576 PTP2YOR208W 2253 nt0.71□□□□□ -2.3
VPS1P21576 YAL063C-AYAL063C-A 291 nt0.71□□□□□ -2.3
VPS1P21576 YAF9YNL107W 681 nt0.71□□□□□ -2.3
VPS1P21576 YIL115W-AYIL115W-A 372 nt0.7□□□□□ -2.3
VPS1P21576 TAR1YLR154W-C 375 nt0.7□□□□□ -2.3
VPS1P21576 RPS25BYLR333C 327 nt0.7□□□□□ -2.3
VPS1P21576 NOP9YJL010C 2001 nt0.69□□□□□ -2.3
VPS1P21576 YDR102CYDR102C 333 nt0.69□□□□□ -2.3
VPS1P21576 YFR012W-AYFR012W-A 87 nt0.69□□□□□ -2.3
VPS1P21576 OLI1Q0130 231 nt0.69□□□□□ -2.3
VPS1P21576 PMP1YCR024C-A 123 nt0.68□□□□□ -2.3
Retrieved 100 of 7,029 protein–RNA pairs in 82 ms