Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBCP0CG48 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.57■□□□□ 0.4
UBCP0CG48 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBCP0CG48 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBCP0CG48 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBCP0CG48 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBCP0CG48 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBCP0CG48 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBCP0CG48 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
UBCP0CG48 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBCP0CG48 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC17.57■□□□□ 0.4
UBCP0CG48 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
UBCP0CG48 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.57■□□□□ 0.4
UBCP0CG48 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBCP0CG48 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.57■□□□□ 0.4
UBCP0CG48 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBCP0CG48 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.57■□□□□ 0.4
UBCP0CG48 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBCP0CG48 TMEM179-206ENST00000616017 1645 ntBASIC17.57■□□□□ 0.4
UBCP0CG48 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.57■□□□□ 0.4
UBCP0CG48 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBCP0CG48 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBCP0CG48 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBCP0CG48 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBCP0CG48 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.57■□□□□ 0.4
UBCP0CG48 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
UBCP0CG48 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
UBCP0CG48 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
UBCP0CG48 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.57■□□□□ 0.4
UBCP0CG48 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBCP0CG48 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
UBCP0CG48 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBCP0CG48 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBCP0CG48 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.56■□□□□ 0.4
UBCP0CG48 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.56■□□□□ 0.4
UBCP0CG48 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBCP0CG48 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
UBCP0CG48 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC17.56■□□□□ 0.4
UBCP0CG48 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
UBCP0CG48 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
UBCP0CG48 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.56■□□□□ 0.4
UBCP0CG48 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBCP0CG48 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.56■□□□□ 0.4
UBCP0CG48 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBCP0CG48 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBCP0CG48 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
UBCP0CG48 BX323043.1-201ENST00000641006 1765 ntBASIC17.56■□□□□ 0.4
UBCP0CG48 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
UBCP0CG48 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBCP0CG48 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBCP0CG48 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBCP0CG48 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.55■□□□□ 0.4
UBCP0CG48 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBCP0CG48 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBCP0CG48 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBCP0CG48 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.55■□□□□ 0.4
UBCP0CG48 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.55■□□□□ 0.4
UBCP0CG48 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
UBCP0CG48 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.55■□□□□ 0.4
UBCP0CG48 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.55■□□□□ 0.4
UBCP0CG48 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.55■□□□□ 0.4
UBCP0CG48 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.55■□□□□ 0.4
UBCP0CG48 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.55■□□□□ 0.4
UBCP0CG48 UBE2DNL-204ENST00000602536 740 ntBASIC17.55■□□□□ 0.4
UBCP0CG48 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.55■□□□□ 0.4
UBCP0CG48 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.55■□□□□ 0.4
UBCP0CG48 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBCP0CG48 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
UBCP0CG48 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBCP0CG48 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBCP0CG48 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBCP0CG48 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBCP0CG48 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.55■□□□□ 0.4
UBCP0CG48 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBCP0CG48 AC087633.2-202ENST00000565166 1439 ntBASIC17.55■□□□□ 0.4
UBCP0CG48 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBCP0CG48 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBCP0CG48 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
UBCP0CG48 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
UBCP0CG48 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.55■□□□□ 0.4
UBCP0CG48 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBCP0CG48 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
UBCP0CG48 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBCP0CG48 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.54■□□□□ 0.4
UBCP0CG48 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBCP0CG48 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBCP0CG48 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBCP0CG48 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
UBCP0CG48 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBCP0CG48 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
UBCP0CG48 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBCP0CG48 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBCP0CG48 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.54■□□□□ 0.4
UBCP0CG48 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.54■□□□□ 0.4
UBCP0CG48 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBCP0CG48 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBCP0CG48 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.54■□□□□ 0.4
UBCP0CG48 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
UBCP0CG48 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
UBCP0CG48 AC018445.3-201ENST00000624177 1945 ntBASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms