Protein–RNA interactions for Protein: P0C0X0

RPS28B, 40S ribosomal protein S28-B, yeastyeast

Known RBP Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS28BP0C0X0 YPL182CYPL182C 384 nt-0.2□□□□□ -2.44
RPS28BP0C0X0 SPO21YOL091W 1830 nt-0.21□□□□□ -2.44
RPS28BP0C0X0 YGR290WYGR290W 444 nt-0.21□□□□□ -2.44
RPS28BP0C0X0 YIL029CYIL029C 429 nt-0.21□□□□□ -2.44
RPS28BP0C0X0 COX5BYIL111W 456 nt-0.21□□□□□ -2.44
RPS28BP0C0X0 STE5YDR103W 2754 nt-0.22□□□□□ -2.44
RPS28BP0C0X0 SNU56YDR240C 1479 nt-0.22□□□□□ -2.44
RPS28BP0C0X0 ORC3YLL004W 1851 nt-0.22□□□□□ -2.44
RPS28BP0C0X0 snR72snR72 98 nt-0.22□□□□□ -2.44
RPS28BP0C0X0 YFR012W-AYFR012W-A 87 nt-0.22□□□□□ -2.44
RPS28BP0C0X0 YDR133CYDR133C 336 nt-0.23□□□□□ -2.45
RPS28BP0C0X0 RPS20YHL015W 366 nt-0.23□□□□□ -2.45
RPS28BP0C0X0 YKL044WYKL044W 321 nt-0.23□□□□□ -2.45
RPS28BP0C0X0 YOL029CYOL029C 606 nt-0.23□□□□□ -2.45
RPS28BP0C0X0 YDR210WYDR210W 228 nt-0.24□□□□□ -2.45
RPS28BP0C0X0 YDR371C-AYDR371C-A 105 nt-0.24□□□□□ -2.45
RPS28BP0C0X0 YKL145W-AYKL145W-A 93 nt-0.24□□□□□ -2.45
RPS28BP0C0X0 YBR206WYBR206W 324 nt-0.24□□□□□ -2.45
RPS28BP0C0X0 PTP2YOR208W 2253 nt-0.25□□□□□ -2.45
RPS28BP0C0X0 RPS26AYGL189C 360 nt-0.25□□□□□ -2.45
RPS28BP0C0X0 YGR025WYGR025W 303 nt-0.25□□□□□ -2.45
RPS28BP0C0X0 YBL008W-AYBL008W-A 240 nt-0.25□□□□□ -2.45
RPS28BP0C0X0 YOL038C-AYOL038C-A 96 nt-0.25□□□□□ -2.45
RPS28BP0C0X0 YKL136WYKL136W 399 nt-0.26□□□□□ -2.45
RPS28BP0C0X0 YAL066WYAL066W 309 nt-0.26□□□□□ -2.45
RPS28BP0C0X0 YCR100CYCR100C 951 nt-0.27□□□□□ -2.45
RPS28BP0C0X0 EMC4YGL231C 573 nt-0.27□□□□□ -2.45
RPS28BP0C0X0 YHL046W-AYHL046W-A 327 nt-0.27□□□□□ -2.45
RPS28BP0C0X0 DCP1YOL149W 696 nt-0.27□□□□□ -2.45
RPS28BP0C0X0 SOV1YMR066W 2697 nt-0.27□□□□□ -2.45
RPS28BP0C0X0 MPC1YGL080W 393 nt-0.28□□□□□ -2.45
RPS28BP0C0X0 TIM13YGR181W 318 nt-0.28□□□□□ -2.45
RPS28BP0C0X0 YML108WYML108W 318 nt-0.28□□□□□ -2.45
RPS28BP0C0X0 YNL146WYNL146W 303 nt-0.28□□□□□ -2.45
RPS28BP0C0X0 snR45snR45 172 nt-0.28□□□□□ -2.45
RPS28BP0C0X0 YOR345CYOR345C 351 nt-0.29□□□□□ -2.46
RPS28BP0C0X0 NIP100YPL174C 2607 nt-0.3□□□□□ -2.46
RPS28BP0C0X0 HMLALPHA2YCL067C 633 nt-0.3□□□□□ -2.46
RPS28BP0C0X0 MATALPHA2YCR039C 633 nt-0.3□□□□□ -2.46
RPS28BP0C0X0 YHR052W-AYHR052W-A 195 nt-0.3□□□□□ -2.46
RPS28BP0C0X0 YHR054W-AYHR054W-A 195 nt-0.3□□□□□ -2.46
RPS28BP0C0X0 YOR029WYOR029W 336 nt-0.3□□□□□ -2.46
RPS28BP0C0X0 snR51snR51 107 nt-0.3□□□□□ -2.46
RPS28BP0C0X0 YKL023C-AYKL023C-A 228 nt-0.32□□□□□ -2.46
RPS28BP0C0X0 NFU1YKL040C 771 nt-0.32□□□□□ -2.46
RPS28BP0C0X0 NNF2YGR089W 2811 nt-0.32□□□□□ -2.46
RPS28BP0C0X0 THO2YNL139C 4794 nt-0.33□□□□□ -2.46
RPS28BP0C0X0 RPF1YHR088W 888 nt-0.33□□□□□ -2.46
RPS28BP0C0X0 MAM33YIL070C 801 nt-0.33□□□□□ -2.46
RPS28BP0C0X0 YJR011CYJR011C 786 nt-0.33□□□□□ -2.46
RPS28BP0C0X0 BER1YLR412W 825 nt-0.33□□□□□ -2.46
RPS28BP0C0X0 YMR321CYMR321C 318 nt-0.33□□□□□ -2.46
RPS28BP0C0X0 NIP1YMR309C 2439 nt-0.34□□□□□ -2.46
RPS28BP0C0X0 YDL016CYDL016C 303 nt-0.34□□□□□ -2.46
RPS28BP0C0X0 SDH7YDR511W 402 nt-0.34□□□□□ -2.46
RPS28BP0C0X0 SVS1YPL163C 783 nt-0.34□□□□□ -2.46
RPS28BP0C0X0 YKU70YMR284W 1809 nt-0.35□□□□□ -2.47
RPS28BP0C0X0 YNL211CYNL211C 261 nt-0.35□□□□□ -2.47
RPS28BP0C0X0 LEE1YPL054W 906 nt-0.35□□□□□ -2.47
RPS28BP0C0X0 YER078W-AYER078W-A 165 nt-0.36□□□□□ -2.47
RPS28BP0C0X0 WIP1YDR374W-A 270 nt-0.37□□□□□ -2.47
RPS28BP0C0X0 COY1YKL179C 2040 nt-0.38□□□□□ -2.47
RPS28BP0C0X0 YCR001WYCR001W 315 nt-0.38□□□□□ -2.47
RPS28BP0C0X0 ATG31YDR022C 591 nt-0.38□□□□□ -2.47
RPS28BP0C0X0 YLR171WYLR171W 390 nt-0.39□□□□□ -2.47
RPS28BP0C0X0 YAR053WYAR053W 297 nt-0.39□□□□□ -2.47
RPS28BP0C0X0 TSC3YBR058C-A 243 nt-0.39□□□□□ -2.47
RPS28BP0C0X0 RAD61YDR014W 1944 nt-0.39□□□□□ -2.47
RPS28BP0C0X0 BUL2YML111W 2763 nt-0.4□□□□□ -2.47
RPS28BP0C0X0 YJR141WYJR141W 1044 nt-0.4□□□□□ -2.47
RPS28BP0C0X0 YOL019W-AYOL019W-A 153 nt-0.4□□□□□ -2.47
RPS28BP0C0X0 snR8snR8 190 nt-0.41□□□□□ -2.48
RPS28BP0C0X0 ANS1YHR126C 480 nt-0.42□□□□□ -2.48
RPS28BP0C0X0 YJL020W-AYJL020W-A 258 nt-0.42□□□□□ -2.48
RPS28BP0C0X0 TFB5YDR079C-A 219 nt-0.43□□□□□ -2.48
RPS28BP0C0X0 YDL011CYDL011C 324 nt-0.44□□□□□ -2.48
RPS28BP0C0X0 YNL058CYNL058C 951 nt-0.44□□□□□ -2.48
RPS28BP0C0X0 SEC10YLR166C 2616 nt-0.45□□□□□ -2.48
RPS28BP0C0X0 SBH2YER019C-A 267 nt-0.45□□□□□ -2.48
RPS28BP0C0X0 SEM1YDR363W-A 270 nt-0.46□□□□□ -2.48
RPS28BP0C0X0 tN(GUU)QtN(GUU)Q 71 nt-0.46□□□□□ -2.48
RPS28BP0C0X0 YDL185C-AYDL185C-A 228 nt-0.47□□□□□ -2.48
RPS28BP0C0X0 RPS30BYOR182C 192 nt-0.47□□□□□ -2.48
RPS28BP0C0X0 GRX5YPL059W 453 nt-0.47□□□□□ -2.48
RPS28BP0C0X0 YEL073CYEL073C 324 nt-0.48□□□□□ -2.49
RPS28BP0C0X0 YGR164WYGR164W 336 nt-0.48□□□□□ -2.49
RPS28BP0C0X0 YLR101CYLR101C 396 nt-0.48□□□□□ -2.49
RPS28BP0C0X0 YMR307C-AYMR307C-A 195 nt-0.48□□□□□ -2.49
RPS28BP0C0X0 YOL014WYOL014W 375 nt-0.48□□□□□ -2.49
RPS28BP0C0X0 YPL229WYPL229W 621 nt-0.48□□□□□ -2.49
RPS28BP0C0X0 tF(GAA)BtF(GAA)B 73 nt-0.49□□□□□ -2.49
RPS28BP0C0X0 tF(GAA)FtF(GAA)F 73 nt-0.49□□□□□ -2.49
RPS28BP0C0X0 tF(GAA)GtF(GAA)G 73 nt-0.49□□□□□ -2.49
RPS28BP0C0X0 tF(GAA)H1tF(GAA)H1 73 nt-0.49□□□□□ -2.49
RPS28BP0C0X0 tF(GAA)H2tF(GAA)H2 73 nt-0.49□□□□□ -2.49
RPS28BP0C0X0 tF(GAA)MtF(GAA)M 73 nt-0.49□□□□□ -2.49
RPS28BP0C0X0 tF(GAA)P1tF(GAA)P1 73 nt-0.49□□□□□ -2.49
RPS28BP0C0X0 tF(GAA)P2tF(GAA)P2 73 nt-0.49□□□□□ -2.49
RPS28BP0C0X0 YHR131W-AYHR131W-A 246 nt-0.49□□□□□ -2.49
RPS28BP0C0X0 snR128snR128 126 nt-0.49□□□□□ -2.49
Retrieved 100 of 7,029 protein–RNA pairs in 22.3 ms