Protein–RNA interactions for Protein: O15111

CHUK, Inhibitor of nuclear factor kappa-B kinase subunit alpha, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHUKO15111 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.61■□□□□ 0.89
CHUKO15111 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHUKO15111 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHUKO15111 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHUKO15111 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHUKO15111 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHUKO15111 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.61■□□□□ 0.89
CHUKO15111 RBM17P2-201ENST00000616397 1405 ntBASIC20.61■□□□□ 0.89
CHUKO15111 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CHUKO15111 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHUKO15111 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHUKO15111 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHUKO15111 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHUKO15111 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHUKO15111 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CHUKO15111 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHUKO15111 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.6■□□□□ 0.89
CHUKO15111 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.6■□□□□ 0.89
CHUKO15111 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.6■□□□□ 0.89
CHUKO15111 AC013268.1-206ENST00000638368 961 ntBASIC20.6■□□□□ 0.89
CHUKO15111 AC112229.1-201ENST00000639295 961 ntBASIC20.6■□□□□ 0.89
CHUKO15111 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHUKO15111 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHUKO15111 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHUKO15111 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.6■□□□□ 0.89
CHUKO15111 AP000974.1-201ENST00000623909 2387 ntBASIC20.6■□□□□ 0.89
CHUKO15111 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHUKO15111 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CHUKO15111 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.6■□□□□ 0.89
CHUKO15111 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.6■□□□□ 0.89
CHUKO15111 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHUKO15111 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHUKO15111 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHUKO15111 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHUKO15111 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHUKO15111 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHUKO15111 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.59■□□□□ 0.89
CHUKO15111 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHUKO15111 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.59■□□□□ 0.89
CHUKO15111 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.59■□□□□ 0.89
CHUKO15111 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.59■□□□□ 0.89
CHUKO15111 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CHUKO15111 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHUKO15111 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHUKO15111 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHUKO15111 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.59■□□□□ 0.89
CHUKO15111 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CHUKO15111 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CHUKO15111 AC007322.1-201ENST00000426983 750 ntBASIC20.59■□□□□ 0.89
CHUKO15111 CROCCP5-201ENST00000436658 830 ntBASIC20.59■□□□□ 0.89
CHUKO15111 AC007322.4-201ENST00000509611 723 ntBASIC20.59■□□□□ 0.89
CHUKO15111 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.59■□□□□ 0.89
CHUKO15111 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.59■□□□□ 0.89
CHUKO15111 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.59■□□□□ 0.89
CHUKO15111 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.59■□□□□ 0.89
CHUKO15111 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHUKO15111 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.59■□□□□ 0.89
CHUKO15111 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHUKO15111 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.59■□□□□ 0.89
CHUKO15111 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CHUKO15111 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHUKO15111 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHUKO15111 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.58■□□□□ 0.89
CHUKO15111 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.58■□□□□ 0.89
CHUKO15111 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
CHUKO15111 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHUKO15111 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CHUKO15111 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.58■□□□□ 0.89
CHUKO15111 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.58■□□□□ 0.89
CHUKO15111 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.58■□□□□ 0.89
CHUKO15111 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CHUKO15111 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.58■□□□□ 0.89
CHUKO15111 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHUKO15111 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.88
CHUKO15111 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CHUKO15111 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CHUKO15111 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CHUKO15111 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CHUKO15111 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHUKO15111 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHUKO15111 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHUKO15111 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.57■□□□□ 0.88
CHUKO15111 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.57■□□□□ 0.88
CHUKO15111 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
CHUKO15111 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.57■□□□□ 0.88
CHUKO15111 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHUKO15111 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CHUKO15111 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CHUKO15111 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHUKO15111 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.57■□□□□ 0.88
CHUKO15111 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CHUKO15111 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC20.56■□□□□ 0.88
CHUKO15111 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHUKO15111 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHUKO15111 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CHUKO15111 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHUKO15111 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CHUKO15111 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CHUKO15111 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CHUKO15111 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms