Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 AC069236.1-201ENST00000604339 616 ntBASIC20.32■□□□□ 0.84
CCDC78A2IDD5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 AC008694.1-202ENST00000636953 945 ntBASIC20.32■□□□□ 0.84
CCDC78A2IDD5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC78A2IDD5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 CDCA4P2-201ENST00000441182 718 ntBASIC20.31■□□□□ 0.84
CCDC78A2IDD5 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 AC090192.1-201ENST00000517740 490 ntBASIC20.31■□□□□ 0.84
CCDC78A2IDD5 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC78A2IDD5 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC78A2IDD5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC78A2IDD5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC78A2IDD5 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
CCDC78A2IDD5 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.3■□□□□ 0.84
CCDC78A2IDD5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC78A2IDD5 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC78A2IDD5 MCRIP2P1-201ENST00000394346 511 ntBASIC20.3■□□□□ 0.84
CCDC78A2IDD5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC78A2IDD5 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC78A2IDD5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC78A2IDD5 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
CCDC78A2IDD5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC20.3■□□□□ 0.84
CCDC78A2IDD5 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC78A2IDD5 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC78A2IDD5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC78A2IDD5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC78A2IDD5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC78A2IDD5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC78A2IDD5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC78A2IDD5 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CCDC78A2IDD5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC78A2IDD5 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC78A2IDD5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC78A2IDD5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC78A2IDD5 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC78A2IDD5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC78A2IDD5 MIR663A-201ENST00000385250 93 ntBASIC20.29■□□□□ 0.84
CCDC78A2IDD5 PGM5P4-201ENST00000421970 445 ntBASIC20.29■□□□□ 0.84
CCDC78A2IDD5 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC78A2IDD5 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC78A2IDD5 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC78A2IDD5 AL050303.2-201ENST00000619798 666 ntBASIC20.29■□□□□ 0.84
CCDC78A2IDD5 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC78A2IDD5 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC78A2IDD5 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC78A2IDD5 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.29■□□□□ 0.84
CCDC78A2IDD5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC78A2IDD5 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC78A2IDD5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC78A2IDD5 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCDC78A2IDD5 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.29■□□□□ 0.84
CCDC78A2IDD5 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCDC78A2IDD5 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC78A2IDD5 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCDC78A2IDD5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC78A2IDD5 TCF3P1-201ENST00000423021 1937 ntBASIC20.28■□□□□ 0.84
CCDC78A2IDD5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC78A2IDD5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CCDC78A2IDD5 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC78A2IDD5 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.28■□□□□ 0.84
CCDC78A2IDD5 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.28■□□□□ 0.84
CCDC78A2IDD5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms