Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 OR2A1-AS1-201ENST00000462305 773 ntBASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 HES2-205ENST00000487437 968 ntTSL 3 BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21■□□□□ 0.95
TCRBV5S1A1TA0A578 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TCRBV5S1A1TA0A578 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV5S1A1TA0A578 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV5S1A1TA0A578 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV5S1A1TA0A578 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV5S1A1TA0A578 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV5S1A1TA0A578 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TCRBV5S1A1TA0A578 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV5S1A1TA0A578 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.99■□□□□ 0.95
TCRBV5S1A1TA0A578 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
TCRBV5S1A1TA0A578 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV5S1A1TA0A578 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.99■□□□□ 0.95
TCRBV5S1A1TA0A578 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV5S1A1TA0A578 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.99■□□□□ 0.95
TCRBV5S1A1TA0A578 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.99■□□□□ 0.95
TCRBV5S1A1TA0A578 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC20.99■□□□□ 0.95
TCRBV5S1A1TA0A578 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.99■□□□□ 0.95
TCRBV5S1A1TA0A578 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TCRBV5S1A1TA0A578 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
TCRBV5S1A1TA0A578 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TCRBV5S1A1TA0A578 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TCRBV5S1A1TA0A578 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.98■□□□□ 0.95
TCRBV5S1A1TA0A578 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
TCRBV5S1A1TA0A578 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC20.98■□□□□ 0.95
TCRBV5S1A1TA0A578 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TCRBV5S1A1TA0A578 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC20.98■□□□□ 0.95
TCRBV5S1A1TA0A578 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.98■□□□□ 0.95
TCRBV5S1A1TA0A578 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.98■□□□□ 0.95
TCRBV5S1A1TA0A578 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
TCRBV5S1A1TA0A578 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
TCRBV5S1A1TA0A578 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.98■□□□□ 0.95
TCRBV5S1A1TA0A578 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 DUSP5P2-201ENST00000426873 1033 ntBASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 AC091874.3-201ENST00000512672 1195 ntBASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 MYC-209ENST00000641252 345 ntBASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
TCRBV5S1A1TA0A578 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TCRBV5S1A1TA0A578 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms