Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 PXK-203ENST00000383715 1756 ntTSL 5 BASIC15.7■□□□□ 0.1
TRAV1-1A0A0B4J248 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 AC120498.9-201ENST00000339021 3867 ntBASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 AL033527.3-201ENST00000566366 1196 ntBASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 MBP-237ENST00000579129 1052 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 AC009237.14-201ENST00000609975 1594 ntBASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TRAV1-1A0A0B4J248 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 AC009113.1-201ENST00000570267 2443 ntBASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TRAV1-1A0A0B4J248 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 SYT6-210ENST00000641643 1587 ntBASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 KRT125P-201ENST00000546827 989 ntBASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 GOLGA2P11-201ENST00000562660 1621 ntBASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRAV1-1A0A0B4J248 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.66■□□□□ 0.1
TRAV1-1A0A0B4J248 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV1-1A0A0B4J248 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV1-1A0A0B4J248 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV1-1A0A0B4J248 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV1-1A0A0B4J248 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV1-1A0A0B4J248 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV1-1A0A0B4J248 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRAV1-1A0A0B4J248 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV1-1A0A0B4J248 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV1-1A0A0B4J248 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TRAV1-1A0A0B4J248 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TRAV1-1A0A0B4J248 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV1-1A0A0B4J248 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRAV1-1A0A0B4J248 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV1-1A0A0B4J248 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV1-1A0A0B4J248 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.66■□□□□ 0.1
TRAV1-1A0A0B4J248 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV1-1A0A0B4J248 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV1-1A0A0B4J248 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRAV1-1A0A0B4J248 KRT8P33-201ENST00000508125 1423 ntBASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms