Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
CDK5RAP1Q96SZ6 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CDK5RAP1Q96SZ6 EEF1A1P4-201ENST00000359165 1405 ntBASIC7.96□□□□□ -1.13
CDK5RAP1Q96SZ6 MAP3K7CL-203ENST00000341618 1855 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
CDK5RAP1Q96SZ6 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC7.96□□□□□ -1.13
CDK5RAP1Q96SZ6 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC7.96□□□□□ -1.13
CDK5RAP1Q96SZ6 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC7.96□□□□□ -1.13
CDK5RAP1Q96SZ6 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC7.96□□□□□ -1.13
CDK5RAP1Q96SZ6 CFAP61-210ENST00000451767 1946 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
CDK5RAP1Q96SZ6 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 AURKA-206ENST00000395913 2169 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 CREM-214ENST00000395887 849 ntTSL 5 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 AC006547.2-201ENST00000412713 526 ntTSL 4 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 AC009237.9-201ENST00000414800 347 ntBASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 AC017104.2-201ENST00000417000 321 ntBASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 TAAR9-201ENST00000434551 1047 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 AC018980.1-201ENST00000457848 862 ntTSL 3 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 TDGF1P6-201ENST00000463873 448 ntBASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 CREM-224ENST00000468236 582 ntTSL 3 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 RN7SL282P-201ENST00000479676 297 ntBASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 RN7SL332P-201ENST00000482163 254 ntBASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 CREM-234ENST00000484283 660 ntTSL 5 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 CREM-236ENST00000487763 429 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 ROPN1B-207ENST00000511082 782 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 RN7SKP157-201ENST00000516174 282 ntBASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 AC012370.2-202ENST00000600508 1099 ntTSL 5 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 OR7E94P-202ENST00000601375 790 ntBASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 AC087893.2-201ENST00000623272 255 ntBASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 AC017037.4-201ENST00000624526 826 ntBASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 LINC00595-211ENST00000634735 535 ntTSL 3 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 CCAR1-218ENST00000630771 4540 ntTSL 5 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 ATM-215ENST00000530958 5718 ntTSL 2 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 TDGF1P3-202ENST00000602699 2710 ntBASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 DLC1-202ENST00000316609 1837 ntTSL 2 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 LINC01747-203ENST00000634603 1377 ntTSL 4 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 ZC3H13-201ENST00000242848 8018 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
CDK5RAP1Q96SZ6 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 TRIM60P14-201ENST00000513444 1419 ntBASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 CASC19-205ENST00000641013 1411 ntBASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 CHAF1B-201ENST00000314103 4480 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 MTA3-201ENST00000405094 1785 ntTSL 5 BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 ADA2-203ENST00000399837 4505 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 HIST1H4F-201ENST00000244537 312 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 HEPACAM2-202ENST00000394468 2148 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 AC226101.1-201ENST00000401483 387 ntBASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 U3.31-201ENST00000408113 216 ntBASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 GAS8-AS1-201ENST00000408886 435 ntBASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 RNU2-5P-201ENST00000410533 180 ntBASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 AL355607.1-201ENST00000427745 295 ntTSL 3 BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 WWC3-AS1-201ENST00000430057 578 ntTSL 3 BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 AL161646.1-201ENST00000447860 1013 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 AC012493.1-201ENST00000453252 760 ntBASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 PXT1-201ENST00000454782 2108 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 RN7SL308P-201ENST00000464971 297 ntBASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 AC079921.2-201ENST00000507579 455 ntTSL 3 BASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 AP004833.1-201ENST00000507987 1238 ntBASIC7.95□□□□□ -1.14
CDK5RAP1Q96SZ6 AC106774.2-201ENST00000510266 406 ntBASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms