Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 MED31-202ENST00000574128 619 ntTSL 3 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 AC008385.1-201ENST00000604421 355 ntBASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 AC135050.6-202ENST00000613584 392 ntBASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 FAM27E3-202ENST00000614611 340 ntBASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 BX005040.2-201ENST00000620504 370 ntBASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 AC002094.5-201ENST00000623773 629 ntBASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 AC133552.3-201ENST00000572236 1869 ntBASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 CASP12-201ENST00000375726 1306 ntAPPRIS P5 TSL 1 (best) BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 FOLH1-213ENST00000533034 2225 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 ELOVL5-207ENST00000542638 2875 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 WDR89-204ENST00000620954 2935 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
NPIPA3F8WFD2 AL161891.1-201ENST00000621575 4636 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 DDX24-201ENST00000330836 2738 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 AC023632.6-201ENST00000624338 2177 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 NF1P7-201ENST00000612076 1530 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 EGFLAM-AS4-201ENST00000512496 1579 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 ESRP1-202ENST00000423620 3746 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 OR9K2-201ENST00000305377 1122 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 RN7SKP236-201ENST00000410635 284 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 AL592182.2-201ENST00000442477 858 ntTSL 2 BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 AL591379.2-201ENST00000450223 397 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 AC124861.1-201ENST00000457178 429 ntTSL 5 BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 GAPDHP61-201ENST00000507324 1005 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 RNA5SP287-201ENST00000516358 103 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 RN7SKP2-201ENST00000517003 319 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 CTHRC1-203ENST00000520337 1198 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 CASP1P2-201ENST00000526830 1258 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 AC103855.4-201ENST00000533158 265 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 AC044860.3-201ENST00000559957 368 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 AC040162.2-201ENST00000573092 157 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 RN7SL42P-201ENST00000579786 294 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 AL035417.2-201ENST00000603887 796 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 ELMO2P1-201ENST00000611569 473 ntTSL 5 BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 AL606760.4-201ENST00000617613 718 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 AC241377.2-202ENST00000636462 997 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 ENSA-215ENST00000638926 360 ntTSL 5 BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 OR9K2-204ENST00000641374 1122 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 MAP4-209ENST00000434267 2772 ntTSL 2 BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 HSP90AB7P-201ENST00000450068 2454 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 HAVCR2-201ENST00000307851 2907 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 AC130456.1-201ENST00000565085 1363 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 G3BP2-203ENST00000395719 4217 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 LINC01482-201ENST00000585484 2616 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 PWRN1-212ENST00000569908 1435 ntBASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 MRPS31-201ENST00000323563 1462 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
NPIPA3F8WFD2 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 AC130464.1-201ENST00000416201 1500 ntBASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 KIAA1257-205ENST00000515659 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 TTLL9-211ENST00000620043 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 PAXIP1-AS2-201ENST00000397551 1692 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 AC008758.2-201ENST00000420038 695 ntTSL 2 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 PGAM1P3-201ENST00000420790 565 ntBASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 AC092162.2-203ENST00000430460 579 ntTSL 4 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 AC099344.1-201ENST00000433548 492 ntBASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC6.91□□□□□ -1.3
NPIPA3F8WFD2 AC022816.1-201ENST00000436469 804 ntTSL 5 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms