Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 CSGALNACT1-201ENST00000332246 3872 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 USP3-208ENST00000558285 1742 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 CARMIL1-201ENST00000329474 5431 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 EFCAB13-203ENST00000517484 3466 ntAPPRIS ALT2 TSL 2 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 ZFP1-202ENST00000393430 3250 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC063949.2-201ENST00000508671 1968 ntTSL 2 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC002540.1-201ENST00000625023 1349 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 FNBP1L-201ENST00000260506 5341 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 TTI2-201ENST00000360742 2242 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 ADGRG1-216ENST00000562631 4042 ntAPPRIS ALT1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 SIGLEC8-201ENST00000321424 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 METTL4-201ENST00000319888 3601 ntTSL 5 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 SSPN-202ENST00000422622 4348 ntTSL 2 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC9.75□□□□□ -0.85
LRCH3Q96II8 ASNSP1-202ENST00000641079 1352 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 SLC30A8-202ENST00000456015 2520 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
LRCH3Q96II8 AC079331.2-201ENST00000623462 2546 ntBASIC9.75□□□□□ -0.85
LRCH3Q96II8 FAM149B1P1-201ENST00000533428 1610 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 MAPK10-375ENST00000641989 2331 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 TBCK-202ENST00000361687 3312 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LRCH3Q96II8 ZNF195-205ENST00000399602 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
LRCH3Q96II8 TACC2-203ENST00000358010 3815 ntTSL 5 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 AFAP1-202ENST00000360265 7479 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
LRCH3Q96II8 AL365217.1-201ENST00000398578 2436 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 ZNHIT6-202ENST00000431532 6080 ntTSL 2 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 TTLL5-221ENST00000557636 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
LRCH3Q96II8 SLC25A14-215ENST00000612248 1734 ntTSL 5 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 ZSCAN26-207ENST00000623276 1998 ntAPPRIS P2 TSL 3 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 RAD17-213ENST00000509734 3233 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 PPP1R10P1-201ENST00000531876 1795 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 MTHFD2P5-201ENST00000320415 844 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 SNORA63-201ENST00000363450 132 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LRCH3Q96II8 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 AC245452.3-201ENST00000413294 162 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 SMARCE1P1-201ENST00000417747 1186 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 AC008063.1-201ENST00000418335 640 ntTSL 3 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 NAP1L4P2-201ENST00000425958 899 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 AP003385.1-201ENST00000426387 893 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 AC092042.3-203ENST00000443313 950 ntTSL 2 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 AC007677.1-201ENST00000445757 515 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 HSD17B3-AS1-201ENST00000448857 1072 ntTSL 2 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 RN7SL213P-201ENST00000463482 317 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 AC018638.4-201ENST00000465971 1150 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 RPL10AP1-201ENST00000490023 643 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 LINC01322-203ENST00000496693 1075 ntTSL 5 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 FAM92A1P2-202ENST00000504766 877 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 MTCO1P31-201ENST00000506355 492 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 AC112192.1-201ENST00000515086 553 ntTSL 4 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 AC087269.1-201ENST00000522213 666 ntTSL 2 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 OR5AK3P-201ENST00000527486 1297 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 STXBP6-206ENST00000548369 682 ntTSL 2 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 AC087897.1-201ENST00000550134 156 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 AC018521.6-201ENST00000584276 335 ntTSL 5 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 AP001269.3-201ENST00000588718 329 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 AC020910.2-201ENST00000603635 610 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 GNAS-AS1_2.1-201ENST00000613404 114 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 AC011472.4-201ENST00000615848 491 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 AC244100.4-201ENST00000617747 388 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 Z98752.3-201ENST00000621802 566 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 AL359757.1-201ENST00000623176 255 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 AL157786.1-207ENST00000627771 695 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 ZBTB20-202ENST00000393785 3323 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LRCH3Q96II8 STX12-201ENST00000373943 3079 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LRCH3Q96II8 RBM22-201ENST00000199814 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LRCH3Q96II8 NHS-204ENST00000615422 8860 ntTSL 5 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 AC114480.1-201ENST00000465933 2919 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LRCH3Q96II8 L3MBTL4-202ENST00000400104 4534 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LRCH3Q96II8 WDR20-201ENST00000299135 2198 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LRCH3Q96II8 TCL6-207ENST00000483087 2194 ntTSL 2 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 POLR2J3-215ENST00000511313 4630 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
LRCH3Q96II8 AGAP1-207ENST00000428334 10090 ntTSL 5 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 CCR1-201ENST00000296140 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LRCH3Q96II8 EIF4A2-201ENST00000323963 1919 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
LRCH3Q96II8 SLMAP-220ENST00000495364 1383 ntTSL 2 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 EEF1A1P7-201ENST00000596811 1394 ntBASIC9.74□□□□□ -0.85
LRCH3Q96II8 KIF13A-213ENST00000636847 5538 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 ABAT-202ENST00000396600 5586 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
LRCH3Q96II8 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
LRCH3Q96II8 ADD2-201ENST00000264436 9267 ntAPPRIS P4 TSL 1 (best) BASIC9.74□□□□□ -0.85
LRCH3Q96II8 ETV1-206ENST00000405218 3391 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms