Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 CMAHP-203ENST00000458373 1101 ntTSL 5 BASIC6.64□□□□□ -1.35
FOXG1P55316 RN7SL228P-201ENST00000470060 303 ntBASIC6.64□□□□□ -1.35
FOXG1P55316 AC005550.2-201ENST00000476382 318 ntBASIC6.64□□□□□ -1.35
FOXG1P55316 LINC00992-201ENST00000504107 617 ntTSL 2 BASIC6.64□□□□□ -1.35
FOXG1P55316 AMTN-202ENST00000504451 761 ntAPPRIS ALT1 TSL 1 (best) BASIC6.64□□□□□ -1.35
FOXG1P55316 GAPDHP61-201ENST00000507324 1005 ntBASIC6.64□□□□□ -1.35
FOXG1P55316 SETP12-201ENST00000514068 805 ntBASIC6.64□□□□□ -1.35
FOXG1P55316 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.64□□□□□ -1.35
FOXG1P55316 AC008013.2-201ENST00000537555 348 ntTSL 5 BASIC6.64□□□□□ -1.35
FOXG1P55316 ORMDL2-203ENST00000548974 671 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
FOXG1P55316 SUPT16H-204ENST00000555943 915 ntTSL 2 BASIC6.64□□□□□ -1.35
FOXG1P55316 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC6.64□□□□□ -1.35
FOXG1P55316 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC6.64□□□□□ -1.35
FOXG1P55316 TRIM69-210ENST00000561043 1017 ntTSL 3 BASIC6.64□□□□□ -1.35
FOXG1P55316 AC013489.1-201ENST00000561140 598 ntTSL 3 BASIC6.64□□□□□ -1.35
FOXG1P55316 AC243312.1-201ENST00000570582 275 ntBASIC6.64□□□□□ -1.35
FOXG1P55316 AC136624.3-201ENST00000571660 567 ntTSL 5 BASIC6.64□□□□□ -1.35
FOXG1P55316 AC007861.1-201ENST00000576671 674 ntTSL 5 BASIC6.64□□□□□ -1.35
FOXG1P55316 OR5AH1P-201ENST00000595968 283 ntBASIC6.64□□□□□ -1.35
FOXG1P55316 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
FOXG1P55316 ZNF528-AS1-204ENST00000601562 1069 ntTSL 5 BASIC6.64□□□□□ -1.35
FOXG1P55316 AC008385.1-201ENST00000604421 355 ntBASIC6.64□□□□□ -1.35
FOXG1P55316 AL391903.2-201ENST00000614532 247 ntBASIC6.64□□□□□ -1.35
FOXG1P55316 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC6.64□□□□□ -1.35
FOXG1P55316 AC073488.8-201ENST00000631952 757 ntBASIC6.64□□□□□ -1.35
FOXG1P55316 AP000842.4-201ENST00000638781 748 ntBASIC6.64□□□□□ -1.35
FOXG1P55316 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC6.64□□□□□ -1.35
FOXG1P55316 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
FOXG1P55316 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
FOXG1P55316 SYT1-212ENST00000552744 2718 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
FOXG1P55316 CDH12-202ENST00000504376 4160 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
FOXG1P55316 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
FOXG1P55316 ALB-203ENST00000415165 1483 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
FOXG1P55316 CENPN-205ENST00000439957 1699 ntTSL 2 BASIC6.64□□□□□ -1.35
FOXG1P55316 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC6.64□□□□□ -1.35
FOXG1P55316 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC6.64□□□□□ -1.35
FOXG1P55316 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
FOXG1P55316 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC6.64□□□□□ -1.35
FOXG1P55316 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.64□□□□□ -1.35
FOXG1P55316 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC6.64□□□□□ -1.35
FOXG1P55316 ALDH1A1-201ENST00000297785 2107 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
FOXG1P55316 FOLH1B-202ENST00000529567 2145 ntBASIC6.64□□□□□ -1.35
FOXG1P55316 SLC22A9-201ENST00000279178 2343 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
FOXG1P55316 AC090198.1-201ENST00000518639 2355 ntTSL 5 BASIC6.64□□□□□ -1.35
FOXG1P55316 ZSCAN12-201ENST00000361028 5495 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
FOXG1P55316 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
FOXG1P55316 OR2A20P-201ENST00000479887 2913 ntBASIC6.63□□□□□ -1.35
FOXG1P55316 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC6.63□□□□□ -1.35
FOXG1P55316 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC6.63□□□□□ -1.35
FOXG1P55316 CRB1-210ENST00000538660 3397 ntTSL 2 BASIC6.63□□□□□ -1.35
FOXG1P55316 EIF4G2-205ENST00000525681 3654 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
FOXG1P55316 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
FOXG1P55316 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
FOXG1P55316 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
FOXG1P55316 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
FOXG1P55316 RNF139-AS1-201ENST00000499418 5654 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FOXG1P55316 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
FOXG1P55316 AKT3-202ENST00000336199 1688 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FOXG1P55316 TMEM126B-201ENST00000358867 989 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
FOXG1P55316 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
FOXG1P55316 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC6.63□□□□□ -1.35
FOXG1P55316 PPP6C-201ENST00000373547 4118 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
FOXG1P55316 ZNF438-203ENST00000375311 2173 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
FOXG1P55316 MIR498-201ENST00000385134 124 ntBASIC6.63□□□□□ -1.35
FOXG1P55316 SP140-203ENST00000392045 3246 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
FOXG1P55316 RPSAP44-201ENST00000406712 884 ntBASIC6.63□□□□□ -1.35
FOXG1P55316 AC012560.1-202ENST00000421324 535 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FOXG1P55316 PSMC1P2-201ENST00000423961 1204 ntBASIC6.63□□□□□ -1.35
FOXG1P55316 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC6.63□□□□□ -1.35
FOXG1P55316 EEF1A1P5-201ENST00000436459 1389 ntBASIC6.63□□□□□ -1.35
FOXG1P55316 AC123904.1-201ENST00000441072 368 ntBASIC6.63□□□□□ -1.35
FOXG1P55316 TDRG1-202ENST00000448433 1015 ntTSL 3 BASIC6.63□□□□□ -1.35
FOXG1P55316 LINC02556-201ENST00000450776 346 ntTSL 3 BASIC6.63□□□□□ -1.35
FOXG1P55316 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FOXG1P55316 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC6.63□□□□□ -1.35
FOXG1P55316 PDPN-205ENST00000487038 607 ntTSL 2 BASIC6.63□□□□□ -1.35
FOXG1P55316 PSMC1P7-201ENST00000495689 1315 ntBASIC6.63□□□□□ -1.35
FOXG1P55316 LINC02511-201ENST00000505736 1668 ntTSL 5 BASIC6.63□□□□□ -1.35
FOXG1P55316 AP004833.1-201ENST00000507987 1238 ntBASIC6.63□□□□□ -1.35
FOXG1P55316 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FOXG1P55316 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC6.63□□□□□ -1.35
FOXG1P55316 PCAT29-202ENST00000558941 545 ntTSL 4 BASIC6.63□□□□□ -1.35
FOXG1P55316 AC021231.1-201ENST00000559246 1342 ntTSL 5 BASIC6.63□□□□□ -1.35
FOXG1P55316 AP003071.2-201ENST00000562772 990 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FOXG1P55316 AL137802.2-201ENST00000562878 1110 ntBASIC6.63□□□□□ -1.35
FOXG1P55316 FRG2IP-201ENST00000563581 781 ntBASIC6.63□□□□□ -1.35
FOXG1P55316 LINC02180-201ENST00000566439 1010 ntTSL 3 BASIC6.63□□□□□ -1.35
FOXG1P55316 AC040162.2-201ENST00000573092 157 ntBASIC6.63□□□□□ -1.35
FOXG1P55316 AC087292.1-201ENST00000573371 512 ntTSL 5 BASIC6.63□□□□□ -1.35
FOXG1P55316 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
FOXG1P55316 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC6.63□□□□□ -1.35
FOXG1P55316 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC6.63□□□□□ -1.35
FOXG1P55316 AC010618.2-201ENST00000596192 460 ntTSL 3 BASIC6.63□□□□□ -1.35
FOXG1P55316 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.63□□□□□ -1.35
FOXG1P55316 AC005518.2-201ENST00000603254 282 ntBASIC6.63□□□□□ -1.35
FOXG1P55316 AC108451.2-201ENST00000603875 538 ntBASIC6.63□□□□□ -1.35
FOXG1P55316 AC026367.2-201ENST00000610630 553 ntBASIC6.63□□□□□ -1.35
FOXG1P55316 AL354733.2-202ENST00000615485 742 ntTSL 5 BASIC6.63□□□□□ -1.35
FOXG1P55316 AC002094.5-201ENST00000623773 629 ntBASIC6.63□□□□□ -1.35
FOXG1P55316 Z96074.1-203ENST00000637685 1746 ntTSL 5 BASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms