Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 STX18-AS1-206ENST00000608184 3047 ntTSL 3 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
SNX18Q96RF0 BCL9P1-201ENST00000506012 2561 ntBASIC7.14□□□□□ -1.27
SNX18Q96RF0 FAM13A-AS1-202ENST00000511543 2453 ntTSL 2 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 DDX21-201ENST00000354185 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SNX18Q96RF0 AC008498.2-201ENST00000624033 2322 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 RBBP5-201ENST00000264515 4404 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SNX18Q96RF0 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SNX18Q96RF0 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SNX18Q96RF0 DHRS9-202ENST00000412271 1465 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SNX18Q96RF0 OAS2-207ENST00000620097 2908 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SNX18Q96RF0 CST11-201ENST00000377007 461 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SNX18Q96RF0 AC004009.1-201ENST00000412413 567 ntTSL 5 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 UPF3AP1-201ENST00000413731 1126 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 AC092066.1-201ENST00000425131 317 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 SEC63P1-201ENST00000425785 1258 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 SMYD1-202ENST00000438570 680 ntTSL 2 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 AC005550.1-201ENST00000438923 312 ntTSL 2 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 ZNF736P1Y-201ENST00000440402 1276 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 RN7SL854P-201ENST00000459767 295 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 AL122013.1-201ENST00000473054 801 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 RN7SL403P-201ENST00000481783 305 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 AL645924.2-201ENST00000508865 900 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 RNA5SP422-201ENST00000516778 111 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 SCARNA20.3-201ENST00000516913 131 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 PTTG3P-201ENST00000521862 606 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 AC090707.1-201ENST00000528795 396 ntTSL 2 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 OR7E15P-201ENST00000533484 967 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 DAZAP2-210ENST00000551313 587 ntTSL 3 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 AC133485.3-201ENST00000562604 262 ntTSL 5 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 AC138907.3-201ENST00000563937 262 ntTSL 3 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 MT1L-202ENST00000566367 78 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 AC138869.2-201ENST00000569850 262 ntTSL 3 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 AC091180.5-201ENST00000576461 382 ntTSL 5 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 AP001021.2-201ENST00000577935 544 ntTSL 5 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 GOSR1-212ENST00000581721 756 ntTSL 5 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 HIGD1B-205ENST00000591513 547 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 AC239803.2-201ENST00000610161 430 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 TTC23L-208ENST00000610313 973 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
SNX18Q96RF0 AC084876.1-201ENST00000612793 641 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 AP005212.4-201ENST00000614206 710 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 AC010538.1-201ENST00000615131 663 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 AL390882.1-201ENST00000618821 594 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 AC108724.2-201ENST00000634593 290 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SNX18Q96RF0 AC068205.4-201ENST00000637880 804 ntBASIC7.13□□□□□ -1.27
SNX18Q96RF0 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SNX18Q96RF0 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SNX18Q96RF0 PSMD5-AS1-213ENST00000640327 3531 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SNX18Q96RF0 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SNX18Q96RF0 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SNX18Q96RF0 SORBS1-212ENST00000371249 5927 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
SNX18Q96RF0 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SNX18Q96RF0 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
SNX18Q96RF0 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SNX18Q96RF0 TM4SF1-201ENST00000305366 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
SNX18Q96RF0 LINC00598-208ENST00000617777 2551 ntTSL 2 BASIC7.13□□□□□ -1.27
SNX18Q96RF0 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
SNX18Q96RF0 CU633967.1-204ENST00000624627 1604 ntTSL 2 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 CYFIP2-201ENST00000435847 3673 ntTSL 2 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 TOPORS-202ENST00000379858 3621 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 TBC1D23-205ENST00000475134 2074 ntTSL 5 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 TCAM1P-205ENST00000478379 3317 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 MRPL55-211ENST00000366738 705 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 RACK1-201ENST00000376817 965 ntTSL 5 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 RAET1K-201ENST00000403651 784 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 RNA5SP265-201ENST00000411023 111 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 RANP7-201ENST00000418085 644 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 AC244453.4-201ENST00000419150 388 ntBASIC7.12□□□□□ -1.27
SNX18Q96RF0 OR10J1-201ENST00000423932 1090 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC7.12□□□□□ -1.27
SNX18Q96RF0 GHRL-207ENST00000437422 443 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SNX18Q96RF0 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC7.12□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms