Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 AC010872.1-201ENST00000624225 675 ntBASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 STK32A-209ENST00000626951 798 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 AP000851.2-201ENST00000629499 721 ntTSL 3 BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 AC120114.2-201ENST00000567795 2272 ntBASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 ZNF655-222ENST00000493277 1815 ntAPPRIS ALT2 TSL 2 BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 GJA10-201ENST00000369352 1652 ntAPPRIS P2 BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 IL5RA-206ENST00000430514 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 TM2D2-203ENST00000456845 3295 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 SLC17A3-203ENST00000361703 1543 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 KDELC1P1-201ENST00000512118 1509 ntBASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 ZC3H14-203ENST00000318308 1384 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 AC009148.1-201ENST00000570148 2693 ntBASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 FHL1-206ENST00000394153 2374 ntTSL 5 BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
TRIM48Q8IWZ4 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 CAST-236ENST00000511782 2466 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AC104581.5-201ENST00000624171 7141 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 IKZF5-201ENST00000368886 4555 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 OR2V2-203ENST00000641791 4428 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 ZSWIM5P3-201ENST00000511265 2743 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 HYDIN2-203ENST00000614586 13885 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 EEF1A1P15-201ENST00000395772 1408 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 C2orf80-201ENST00000341287 1238 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 DYNLRB1-202ENST00000357156 675 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 RPL12-201ENST00000361436 633 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 RNU1-21P-201ENST00000363327 163 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 IGLV3-32-201ENST00000390303 383 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 PCNAP3-201ENST00000397222 778 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 UBE2V1P15-201ENST00000407776 448 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AL445524.1-205ENST00000425412 392 ntTSL 2 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 ECHDC1-207ENST00000430841 1009 ntAPPRIS P3 TSL 5 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 KRTAP9-11P-201ENST00000431013 525 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AL031963.2-201ENST00000433761 398 ntTSL 2 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 MAPRE1P3-201ENST00000435438 796 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AL137027.1-201ENST00000440358 444 ntTSL 2 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AC239798.1-201ENST00000449024 1176 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AL353718.1-201ENST00000451028 517 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 RPL12P21-201ENST00000472214 518 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 PA2G4P4-201ENST00000473864 1182 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 MORF4L2P1-201ENST00000503761 858 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 C1GALT1P2-201ENST00000510813 1104 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AC068134.3-201ENST00000513620 788 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AC105345.2-201ENST00000515186 664 ntTSL 3 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 DCSTAMP-203ENST00000517991 949 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AP000757.2-201ENST00000531850 557 ntTSL 5 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AL049874.4-201ENST00000557593 255 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AC009119.1-202ENST00000567342 543 ntTSL 4 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 LINC00674-202ENST00000590734 160 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AC097504.2-201ENST00000608088 454 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AC243772.3-202ENST00000609662 1148 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AC243830.3-201ENST00000616810 376 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 REST-209ENST00000622863 1106 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AC241585.4-201ENST00000640951 686 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 MYRFL-203ENST00000547771 3465 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 CORIN-205ENST00000504584 2417 ntTSL 2 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AC026356.1-201ENST00000622688 1357 ntBASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 MS4A10-201ENST00000308287 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 AC106869.1-203ENST00000419035 1892 ntTSL 2 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 MEF2C-221ENST00000514015 2772 ntTSL 5 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 LINC01103-201ENST00000430551 1457 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 OR6N1-203ENST00000641846 2640 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
TRIM48Q8IWZ4 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 FANCL-203ENST00000403295 1576 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
TRIM48Q8IWZ4 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms