Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC7.15□□□□□ -1.26
SNX18Q96RF0 UBE2CP1-201ENST00000557130 554 ntBASIC7.15□□□□□ -1.26
SNX18Q96RF0 AC099508.2-201ENST00000563098 510 ntTSL 3 BASIC7.15□□□□□ -1.26
SNX18Q96RF0 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC7.15□□□□□ -1.26
SNX18Q96RF0 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC7.15□□□□□ -1.26
SNX18Q96RF0 GMFG-210ENST00000601387 497 ntTSL 3 BASIC7.15□□□□□ -1.26
SNX18Q96RF0 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC7.15□□□□□ -1.26
SNX18Q96RF0 RBM22P6-201ENST00000611682 867 ntBASIC7.15□□□□□ -1.26
SNX18Q96RF0 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC7.15□□□□□ -1.26
SNX18Q96RF0 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC7.15□□□□□ -1.26
SNX18Q96RF0 AC048380.3-201ENST00000623145 796 ntBASIC7.15□□□□□ -1.26
SNX18Q96RF0 AC244517.10-201ENST00000624396 548 ntAPPRIS P1 TSL 4 BASIC7.15□□□□□ -1.26
SNX18Q96RF0 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.15□□□□□ -1.26
SNX18Q96RF0 AC138627.1-204ENST00000641894 765 ntBASIC7.15□□□□□ -1.26
SNX18Q96RF0 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.15□□□□□ -1.26
SNX18Q96RF0 AL513523.1-201ENST00000417868 1309 ntBASIC7.15□□□□□ -1.26
SNX18Q96RF0 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SNX18Q96RF0 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SNX18Q96RF0 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SNX18Q96RF0 TCTN1-201ENST00000377654 1539 ntTSL 5 BASIC7.15□□□□□ -1.27
SNX18Q96RF0 SOCS5P4-201ENST00000454743 1566 ntBASIC7.15□□□□□ -1.27
SNX18Q96RF0 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.27
SNX18Q96RF0 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SNX18Q96RF0 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
SNX18Q96RF0 CACNB4-263ENST00000637779 1772 ntTSL 5 BASIC7.15□□□□□ -1.27
SNX18Q96RF0 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.27
SNX18Q96RF0 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC7.15□□□□□ -1.27
SNX18Q96RF0 GMFB-209ENST00000616146 4125 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
SNX18Q96RF0 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
SNX18Q96RF0 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC7.15□□□□□ -1.27
SNX18Q96RF0 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SNX18Q96RF0 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SNX18Q96RF0 LINC01105-204ENST00000444416 2695 ntTSL 2 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 CTNND1-233ENST00000532787 5751 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SNX18Q96RF0 LL22NC03-63E9.3-201ENST00000407120 3111 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SNX18Q96RF0 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
SNX18Q96RF0 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SNX18Q96RF0 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 RIT2-201ENST00000326695 1092 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SNX18Q96RF0 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SNX18Q96RF0 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 BCL2L14-204ENST00000396367 1886 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SNX18Q96RF0 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 NPM1P36-201ENST00000415681 835 ntBASIC7.14□□□□□ -1.27
SNX18Q96RF0 MICU1-204ENST00000418483 1212 ntTSL 2 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 AL049758.1-201ENST00000423154 397 ntBASIC7.14□□□□□ -1.27
SNX18Q96RF0 AC016722.2-201ENST00000429761 1835 ntTSL 2 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 KRTAP9-11P-201ENST00000431013 525 ntBASIC7.14□□□□□ -1.27
SNX18Q96RF0 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SNX18Q96RF0 AC073475.1-201ENST00000434012 592 ntBASIC7.14□□□□□ -1.27
SNX18Q96RF0 ITM2A-202ENST00000434584 1698 ntTSL 2 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 ANKRD55-202ENST00000434982 1518 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SNX18Q96RF0 AC123904.1-201ENST00000441072 368 ntBASIC7.14□□□□□ -1.27
SNX18Q96RF0 AL157414.2-201ENST00000442780 377 ntTSL 3 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 LINC01015-204ENST00000445296 399 ntTSL 3 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 PSMA2-204ENST00000445517 683 ntTSL 2 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 FTH1P7-201ENST00000450676 552 ntBASIC7.14□□□□□ -1.27
SNX18Q96RF0 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 AL135908.1-202ENST00000454135 562 ntTSL 2 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 RN7SL621P-201ENST00000472565 299 ntBASIC7.14□□□□□ -1.27
SNX18Q96RF0 CYP2C19-202ENST00000480405 1417 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SNX18Q96RF0 AL449212.1-201ENST00000499853 517 ntBASIC7.14□□□□□ -1.27
SNX18Q96RF0 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 STX18-IT1-201ENST00000515487 542 ntTSL 4 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 CCL26-201ENST00000005180 526 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SNX18Q96RF0 NACA2-201ENST00000521764 777 ntAPPRIS P1 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 AP001781.2-201ENST00000529841 783 ntTSL 3 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 RERGL-203ENST00000538724 973 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 MRPL40P1-201ENST00000542687 604 ntBASIC7.14□□□□□ -1.27
SNX18Q96RF0 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 UBE2Q2P11-201ENST00000559691 205 ntBASIC7.14□□□□□ -1.27
SNX18Q96RF0 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 RIT2-202ENST00000589109 1156 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
SNX18Q96RF0 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 AL445223.1-201ENST00000595998 1051 ntBASIC7.14□□□□□ -1.27
SNX18Q96RF0 AC008392.1-201ENST00000600941 437 ntTSL 2 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 AC004918.3-201ENST00000602609 925 ntBASIC7.14□□□□□ -1.27
SNX18Q96RF0 AC007346.1-202ENST00000602826 684 ntBASIC7.14□□□□□ -1.27
SNX18Q96RF0 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SNX18Q96RF0 AP002345.2-201ENST00000609961 904 ntBASIC7.14□□□□□ -1.27
SNX18Q96RF0 RNVU1-19-201ENST00000613023 167 ntBASIC7.14□□□□□ -1.27
SNX18Q96RF0 FAM74A6-203ENST00000615956 481 ntBASIC7.14□□□□□ -1.27
SNX18Q96RF0 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SNX18Q96RF0 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SNX18Q96RF0 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SNX18Q96RF0 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 NECAP1-221ENST00000639955 3479 ntAPPRIS P2 TSL 5 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SNX18Q96RF0 PLP1-220ENST00000612423 3132 ntAPPRIS P1 TSL 2 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
SNX18Q96RF0 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms