Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 KRT8P20-201ENST00000423953 1409 ntBASIC21.28■■□□□ 1
PCDHGC3Q9UN70 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.28■■□□□ 1
PCDHGC3Q9UN70 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.27■■□□□ 1
PCDHGC3Q9UN70 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.27■■□□□ 1
PCDHGC3Q9UN70 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGC3Q9UN70 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGC3Q9UN70 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC21.27■■□□□ 1
PCDHGC3Q9UN70 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.27■■□□□ 1
PCDHGC3Q9UN70 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
PCDHGC3Q9UN70 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
PCDHGC3Q9UN70 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.27■■□□□ 1
PCDHGC3Q9UN70 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.27■■□□□ 1
PCDHGC3Q9UN70 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.27■■□□□ 1
PCDHGC3Q9UN70 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.27■■□□□ 1
PCDHGC3Q9UN70 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PCDHGC3Q9UN70 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.27■■□□□ 1
PCDHGC3Q9UN70 AC104771.1-201ENST00000603335 964 ntBASIC21.27■■□□□ 1
PCDHGC3Q9UN70 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.27■■□□□ 1
PCDHGC3Q9UN70 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.27■■□□□ 1
PCDHGC3Q9UN70 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHGC3Q9UN70 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHGC3Q9UN70 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
PCDHGC3Q9UN70 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.27■□□□□ 0.99
PCDHGC3Q9UN70 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
PCDHGC3Q9UN70 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 AC073210.2-201ENST00000430369 194 ntBASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 MYC-209ENST00000641252 345 ntBASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHGC3Q9UN70 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 AL138781.1-201ENST00000566567 1274 ntBASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 AC142086.2-201ENST00000569753 217 ntBASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PCDHGC3Q9UN70 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGC3Q9UN70 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
PCDHGC3Q9UN70 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGC3Q9UN70 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGC3Q9UN70 AC112907.3-201ENST00000577781 2400 ntBASIC21.24■□□□□ 0.99
PCDHGC3Q9UN70 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGC3Q9UN70 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.24■□□□□ 0.99
PCDHGC3Q9UN70 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGC3Q9UN70 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGC3Q9UN70 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGC3Q9UN70 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
PCDHGC3Q9UN70 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
PCDHGC3Q9UN70 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.24■□□□□ 0.99
PCDHGC3Q9UN70 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHGC3Q9UN70 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.24■□□□□ 0.99
PCDHGC3Q9UN70 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.24■□□□□ 0.99
PCDHGC3Q9UN70 MOK-233ENST00000524214 1539 ntTSL 2 BASIC21.24■□□□□ 0.99
PCDHGC3Q9UN70 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.23■□□□□ 0.99
PCDHGC3Q9UN70 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
PCDHGC3Q9UN70 HLA-G-202ENST00000376815 851 ntBASIC21.23■□□□□ 0.99
PCDHGC3Q9UN70 HLA-G-203ENST00000376818 1127 ntBASIC21.23■□□□□ 0.99
PCDHGC3Q9UN70 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.23■□□□□ 0.99
PCDHGC3Q9UN70 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.23■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms