Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.34■□□□□ 0.69
LRTM1Q9HBL6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRTM1Q9HBL6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.34■□□□□ 0.69
LRTM1Q9HBL6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRTM1Q9HBL6 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LRTM1Q9HBL6 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRTM1Q9HBL6 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.34■□□□□ 0.69
LRTM1Q9HBL6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRTM1Q9HBL6 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LRTM1Q9HBL6 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRTM1Q9HBL6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LRTM1Q9HBL6 AC007952.6-201ENST00000573168 2673 ntBASIC19.33■□□□□ 0.69
LRTM1Q9HBL6 AC003957.1-201ENST00000625108 2673 ntBASIC19.33■□□□□ 0.69
LRTM1Q9HBL6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
LRTM1Q9HBL6 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRTM1Q9HBL6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LRTM1Q9HBL6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LRTM1Q9HBL6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.33■□□□□ 0.68
LRTM1Q9HBL6 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.33■□□□□ 0.68
LRTM1Q9HBL6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.33■□□□□ 0.68
LRTM1Q9HBL6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.33■□□□□ 0.68
LRTM1Q9HBL6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.33■□□□□ 0.68
LRTM1Q9HBL6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.33■□□□□ 0.68
LRTM1Q9HBL6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.33■□□□□ 0.68
LRTM1Q9HBL6 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
LRTM1Q9HBL6 MIR6821-201ENST00000617625 74 ntBASIC19.33■□□□□ 0.68
LRTM1Q9HBL6 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRTM1Q9HBL6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRTM1Q9HBL6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRTM1Q9HBL6 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.33■□□□□ 0.68
LRTM1Q9HBL6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LRTM1Q9HBL6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.33■□□□□ 0.68
LRTM1Q9HBL6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 AC007322.4-201ENST00000509611 723 ntBASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 AL162412.1-201ENST00000567129 965 ntBASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 AC087623.3-201ENST00000607047 1098 ntBASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 AC016405.3-201ENST00000607710 860 ntBASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 AC013268.1-206ENST00000638368 961 ntBASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 AC112229.1-201ENST00000639295 961 ntBASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 AL691432.2-201ENST00000607222 2038 ntBASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.32■□□□□ 0.68
LRTM1Q9HBL6 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 AC137761.2-201ENST00000561729 223 ntBASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 AC145350.3-201ENST00000569033 163 ntBASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LRTM1Q9HBL6 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LRTM1Q9HBL6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms