Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
TRIM62Q9BVG3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 KRT16P6-202ENST00000425692 1426 ntBASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 MAX-217ENST00000557277 728 ntTSL 3 BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.96■□□□□ 0.95
TRIM62Q9BVG3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM62Q9BVG3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
TRIM62Q9BVG3 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM62Q9BVG3 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.95■□□□□ 0.94
TRIM62Q9BVG3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM62Q9BVG3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM62Q9BVG3 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM62Q9BVG3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM62Q9BVG3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM62Q9BVG3 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM62Q9BVG3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
TRIM62Q9BVG3 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM62Q9BVG3 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.95■□□□□ 0.94
TRIM62Q9BVG3 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
TRIM62Q9BVG3 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM62Q9BVG3 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.93■□□□□ 0.94
TRIM62Q9BVG3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM62Q9BVG3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM62Q9BVG3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM62Q9BVG3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM62Q9BVG3 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM62Q9BVG3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
TRIM62Q9BVG3 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM62Q9BVG3 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.93■□□□□ 0.94
TRIM62Q9BVG3 UNC93B4-201ENST00000505679 747 ntBASIC20.93■□□□□ 0.94
TRIM62Q9BVG3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.93■□□□□ 0.94
TRIM62Q9BVG3 AP003097.1-201ENST00000530657 1135 ntBASIC20.93■□□□□ 0.94
TRIM62Q9BVG3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
TRIM62Q9BVG3 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
TRIM62Q9BVG3 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
TRIM62Q9BVG3 SOX15-203ENST00000570788 1093 ntBASIC20.93■□□□□ 0.94
TRIM62Q9BVG3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms