Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
RNF2Q99496 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF2Q99496 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF2Q99496 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF2Q99496 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF2Q99496 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.96■□□□□ 0.15
RNF2Q99496 MIR6821-201ENST00000617625 74 ntBASIC15.96■□□□□ 0.15
RNF2Q99496 PCDHAC2-203ENST00000615316 3011 ntBASIC15.96■□□□□ 0.15
RNF2Q99496 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
RNF2Q99496 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF2Q99496 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RNF2Q99496 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF2Q99496 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF2Q99496 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF2Q99496 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF2Q99496 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF2Q99496 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF2Q99496 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
RNF2Q99496 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF2Q99496 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF2Q99496 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF2Q99496 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC15.95■□□□□ 0.14
RNF2Q99496 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF2Q99496 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.95■□□□□ 0.14
RNF2Q99496 DUX4L2-201ENST00000561772 1275 ntBASIC15.95■□□□□ 0.14
RNF2Q99496 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC15.95■□□□□ 0.14
RNF2Q99496 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF2Q99496 AC087623.3-201ENST00000607047 1098 ntBASIC15.95■□□□□ 0.14
RNF2Q99496 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF2Q99496 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC15.95■□□□□ 0.14
RNF2Q99496 DUX4L6-201ENST00000626483 1275 ntBASIC15.95■□□□□ 0.14
RNF2Q99496 DUX4L1-201ENST00000627662 1275 ntBASIC15.95■□□□□ 0.14
RNF2Q99496 DUX4L8-201ENST00000629013 1275 ntBASIC15.95■□□□□ 0.14
RNF2Q99496 DUX4L3-201ENST00000630187 1275 ntBASIC15.95■□□□□ 0.14
RNF2Q99496 DUX4L7-201ENST00000630678 1275 ntBASIC15.95■□□□□ 0.14
RNF2Q99496 DUX4L5-201ENST00000630834 1275 ntBASIC15.95■□□□□ 0.14
RNF2Q99496 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
RNF2Q99496 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF2Q99496 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
RNF2Q99496 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF2Q99496 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RNF2Q99496 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF2Q99496 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF2Q99496 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF2Q99496 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC15.95■□□□□ 0.14
RNF2Q99496 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF2Q99496 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF2Q99496 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RNF2Q99496 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RNF2Q99496 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
RNF2Q99496 AC026471.1-201ENST00000564629 3026 ntBASIC15.94■□□□□ 0.14
RNF2Q99496 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF2Q99496 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF2Q99496 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RNF2Q99496 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.94■□□□□ 0.14
RNF2Q99496 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF2Q99496 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF2Q99496 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF2Q99496 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC15.94■□□□□ 0.14
RNF2Q99496 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.94■□□□□ 0.14
RNF2Q99496 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
RNF2Q99496 RARRES2P6-201ENST00000567333 442 ntBASIC15.94■□□□□ 0.14
RNF2Q99496 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
RNF2Q99496 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF2Q99496 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.94■□□□□ 0.14
RNF2Q99496 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
RNF2Q99496 TCF3P1-201ENST00000423021 1937 ntBASIC15.94■□□□□ 0.14
RNF2Q99496 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
RNF2Q99496 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RNF2Q99496 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF2Q99496 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF2Q99496 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF2Q99496 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF2Q99496 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF2Q99496 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF2Q99496 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.93■□□□□ 0.14
RNF2Q99496 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RNF2Q99496 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.93■□□□□ 0.14
RNF2Q99496 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RNF2Q99496 AC034268.1-201ENST00000441047 882 ntBASIC15.93■□□□□ 0.14
RNF2Q99496 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF2Q99496 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.93■□□□□ 0.14
RNF2Q99496 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.93■□□□□ 0.14
RNF2Q99496 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.93■□□□□ 0.14
RNF2Q99496 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC15.93■□□□□ 0.14
RNF2Q99496 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC15.93■□□□□ 0.14
RNF2Q99496 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC15.93■□□□□ 0.14
RNF2Q99496 AC104187.1-201ENST00000607510 612 ntBASIC15.93■□□□□ 0.14
RNF2Q99496 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
RNF2Q99496 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF2Q99496 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
RNF2Q99496 AC004854.2-201ENST00000608450 1441 ntBASIC15.93■□□□□ 0.14
RNF2Q99496 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF2Q99496 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF2Q99496 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
RNF2Q99496 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
RNF2Q99496 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF2Q99496 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF2Q99496 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF2Q99496 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms