Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCAMP4Q969E2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SCAMP4Q969E2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20■□□□□ 0.79
SCAMP4Q969E2 AC092667.1-201ENST00000434301 2586 ntBASIC20■□□□□ 0.79
SCAMP4Q969E2 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCAMP4Q969E2 AC020907.5-201ENST00000624372 1936 ntBASIC20■□□□□ 0.79
SCAMP4Q969E2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20■□□□□ 0.79
SCAMP4Q969E2 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCAMP4Q969E2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
SCAMP4Q969E2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCAMP4Q969E2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SCAMP4Q969E2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20■□□□□ 0.79
SCAMP4Q969E2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20■□□□□ 0.79
SCAMP4Q969E2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCAMP4Q969E2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCAMP4Q969E2 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCAMP4Q969E2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCAMP4Q969E2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.99■□□□□ 0.79
SCAMP4Q969E2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.99■□□□□ 0.79
SCAMP4Q969E2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.99■□□□□ 0.79
SCAMP4Q969E2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.99■□□□□ 0.79
SCAMP4Q969E2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCAMP4Q969E2 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCAMP4Q969E2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.99■□□□□ 0.79
SCAMP4Q969E2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCAMP4Q969E2 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SCAMP4Q969E2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCAMP4Q969E2 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.99■□□□□ 0.79
SCAMP4Q969E2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCAMP4Q969E2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCAMP4Q969E2 AP005212.1-201ENST00000581547 1997 ntBASIC19.99■□□□□ 0.79
SCAMP4Q969E2 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCAMP4Q969E2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.99■□□□□ 0.79
SCAMP4Q969E2 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC19.99■□□□□ 0.79
SCAMP4Q969E2 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 AL390719.1-204ENST00000412397 1219 ntBASIC19.98■□□□□ 0.79
SCAMP4Q969E2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 AC023632.3-201ENST00000521633 145 ntBASIC19.98■□□□□ 0.79
SCAMP4Q969E2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.98■□□□□ 0.79
SCAMP4Q969E2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCAMP4Q969E2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCAMP4Q969E2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCAMP4Q969E2 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.97■□□□□ 0.79
SCAMP4Q969E2 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.97■□□□□ 0.79
SCAMP4Q969E2 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCAMP4Q969E2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.97■□□□□ 0.79
SCAMP4Q969E2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SCAMP4Q969E2 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.97■□□□□ 0.79
SCAMP4Q969E2 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.97■□□□□ 0.79
SCAMP4Q969E2 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.97■□□□□ 0.79
SCAMP4Q969E2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCAMP4Q969E2 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.97■□□□□ 0.79
SCAMP4Q969E2 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.97■□□□□ 0.79
SCAMP4Q969E2 AC006058.3-201ENST00000606217 1069 ntBASIC19.97■□□□□ 0.79
SCAMP4Q969E2 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.97■□□□□ 0.79
SCAMP4Q969E2 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.97■□□□□ 0.79
SCAMP4Q969E2 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SCAMP4Q969E2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.97■□□□□ 0.79
SCAMP4Q969E2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.97■□□□□ 0.79
SCAMP4Q969E2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SCAMP4Q969E2 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms