Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 MIR572-201ENST00000384983 95 ntBASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 AL136116.3-201ENST00000402907 1138 ntBASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 AC027682.1-201ENST00000562846 899 ntBASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 AL136162.1-201ENST00000607711 1078 ntBASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 AC098818.2-201ENST00000564925 2320 ntBASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CCDC71LQ8N9Z2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CCDC71LQ8N9Z2 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 AC099791.1-201ENST00000416440 715 ntBASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 AC024257.2-201ENST00000549699 147 ntBASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 AC135279.3-201ENST00000610945 1311 ntBASIC16.7■□□□□ 0.26
CCDC71LQ8N9Z2 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 DPP3P2-201ENST00000416030 1696 ntBASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CCDC71LQ8N9Z2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CCDC71LQ8N9Z2 CPT2-209ENST00000636935 803 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms