Protein–RNA interactions for Protein: Q8N9R6

CDRT4, CMT1A duplicated region transcript 4 protein, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT4Q8N9R6 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.71■□□□□ 0.59
CDRT4Q8N9R6 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.71■□□□□ 0.59
CDRT4Q8N9R6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDRT4Q8N9R6 AL121832.2-201ENST00000610979 668 ntBASIC18.71■□□□□ 0.59
CDRT4Q8N9R6 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CDRT4Q8N9R6 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.71■□□□□ 0.59
CDRT4Q8N9R6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.71■□□□□ 0.59
CDRT4Q8N9R6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDRT4Q8N9R6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
CDRT4Q8N9R6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDRT4Q8N9R6 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CDRT4Q8N9R6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDRT4Q8N9R6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDRT4Q8N9R6 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.7■□□□□ 0.58
CDRT4Q8N9R6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.7■□□□□ 0.58
CDRT4Q8N9R6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.7■□□□□ 0.58
CDRT4Q8N9R6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
CDRT4Q8N9R6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.7■□□□□ 0.58
CDRT4Q8N9R6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.7■□□□□ 0.58
CDRT4Q8N9R6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.7■□□□□ 0.58
CDRT4Q8N9R6 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.7■□□□□ 0.58
CDRT4Q8N9R6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CDRT4Q8N9R6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.7■□□□□ 0.58
CDRT4Q8N9R6 AL391422.3-201ENST00000603791 2761 ntBASIC18.7■□□□□ 0.58
CDRT4Q8N9R6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 C2orf69P4-201ENST00000565394 541 ntBASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CDRT4Q8N9R6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 BX119927.1-201ENST00000636596 1552 ntBASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 PTBP1P-201ENST00000554374 1601 ntBASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 BX276092.2-201ENST00000417668 665 ntBASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 AC083906.2-201ENST00000511578 360 ntBASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.68■□□□□ 0.58
CDRT4Q8N9R6 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.67■□□□□ 0.58
CDRT4Q8N9R6 TCF3P1-201ENST00000423021 1937 ntBASIC18.66■□□□□ 0.58
CDRT4Q8N9R6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDRT4Q8N9R6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDRT4Q8N9R6 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CDRT4Q8N9R6 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.66■□□□□ 0.58
CDRT4Q8N9R6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms