Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH20Q8N6Y1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH20Q8N6Y1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH20Q8N6Y1 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH20Q8N6Y1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.53■□□□□ 0.88
PCDH20Q8N6Y1 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDH20Q8N6Y1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH20Q8N6Y1 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH20Q8N6Y1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH20Q8N6Y1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PCDH20Q8N6Y1 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
PCDH20Q8N6Y1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.53■□□□□ 0.88
PCDH20Q8N6Y1 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PCDH20Q8N6Y1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH20Q8N6Y1 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH20Q8N6Y1 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH20Q8N6Y1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDH20Q8N6Y1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PCDH20Q8N6Y1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH20Q8N6Y1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH20Q8N6Y1 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH20Q8N6Y1 ESRRAP1-201ENST00000400596 1257 ntBASIC20.52■□□□□ 0.88
PCDH20Q8N6Y1 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.52■□□□□ 0.88
PCDH20Q8N6Y1 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.52■□□□□ 0.88
PCDH20Q8N6Y1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.52■□□□□ 0.88
PCDH20Q8N6Y1 AP003097.1-201ENST00000530657 1135 ntBASIC20.52■□□□□ 0.88
PCDH20Q8N6Y1 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH20Q8N6Y1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PCDH20Q8N6Y1 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PCDH20Q8N6Y1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PCDH20Q8N6Y1 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.52■□□□□ 0.88
PCDH20Q8N6Y1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDH20Q8N6Y1 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDH20Q8N6Y1 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PCDH20Q8N6Y1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.52■□□□□ 0.87
PCDH20Q8N6Y1 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
PCDH20Q8N6Y1 AC092667.1-201ENST00000434301 2586 ntBASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 AC026366.1-201ENST00000488803 879 ntBASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
PCDH20Q8N6Y1 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 FP700111.2-201ENST00000619190 1892 ntBASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PCDH20Q8N6Y1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 AC007225.1-201ENST00000566331 1836 ntBASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 AL121603.2-201ENST00000557373 2117 ntBASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.49■□□□□ 0.87
PCDH20Q8N6Y1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms