Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
CHD1LQ86WJ1 AC105020.6-201ENST00000621523 1217 ntBASIC24.89■■□□□ 1.58
CHD1LQ86WJ1 AC092437.1-201ENST00000624794 1048 ntBASIC24.89■■□□□ 1.58
CHD1LQ86WJ1 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHD1LQ86WJ1 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHD1LQ86WJ1 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHD1LQ86WJ1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
CHD1LQ86WJ1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC24.89■■□□□ 1.57
CHD1LQ86WJ1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
CHD1LQ86WJ1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC24.89■■□□□ 1.57
CHD1LQ86WJ1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC24.88■■□□□ 1.57
CHD1LQ86WJ1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC24.88■■□□□ 1.57
CHD1LQ86WJ1 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC24.88■■□□□ 1.57
CHD1LQ86WJ1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC24.88■■□□□ 1.57
CHD1LQ86WJ1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHD1LQ86WJ1 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CHD1LQ86WJ1 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHD1LQ86WJ1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC24.88■■□□□ 1.57
CHD1LQ86WJ1 AL355472.2-201ENST00000422958 438 ntBASIC24.88■■□□□ 1.57
CHD1LQ86WJ1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
CHD1LQ86WJ1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC24.88■■□□□ 1.57
CHD1LQ86WJ1 CYP2T3P-201ENST00000601990 817 ntBASIC24.88■■□□□ 1.57
CHD1LQ86WJ1 AC069236.1-201ENST00000604339 616 ntBASIC24.88■■□□□ 1.57
CHD1LQ86WJ1 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHD1LQ86WJ1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC24.88■■□□□ 1.57
CHD1LQ86WJ1 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC24.88■■□□□ 1.57
CHD1LQ86WJ1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHD1LQ86WJ1 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC24.88■■□□□ 1.57
CHD1LQ86WJ1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHD1LQ86WJ1 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHD1LQ86WJ1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
CHD1LQ86WJ1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHD1LQ86WJ1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
CHD1LQ86WJ1 AC004911.1-201ENST00000416316 871 ntBASIC24.87■■□□□ 1.57
CHD1LQ86WJ1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.87■■□□□ 1.57
CHD1LQ86WJ1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC24.87■■□□□ 1.57
CHD1LQ86WJ1 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHD1LQ86WJ1 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC24.87■■□□□ 1.57
CHD1LQ86WJ1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHD1LQ86WJ1 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
CHD1LQ86WJ1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHD1LQ86WJ1 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHD1LQ86WJ1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC24.86■■□□□ 1.57
CHD1LQ86WJ1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC24.86■■□□□ 1.57
CHD1LQ86WJ1 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHD1LQ86WJ1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC24.86■■□□□ 1.57
CHD1LQ86WJ1 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
CHD1LQ86WJ1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.86■■□□□ 1.57
CHD1LQ86WJ1 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.86■■□□□ 1.57
CHD1LQ86WJ1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.86■■□□□ 1.57
CHD1LQ86WJ1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHD1LQ86WJ1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
CHD1LQ86WJ1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC24.86■■□□□ 1.57
CHD1LQ86WJ1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHD1LQ86WJ1 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
CHD1LQ86WJ1 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHD1LQ86WJ1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHD1LQ86WJ1 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHD1LQ86WJ1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CHD1LQ86WJ1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC24.85■■□□□ 1.57
CHD1LQ86WJ1 OR10C1-204ENST00000622521 1039 ntBASIC24.85■■□□□ 1.57
CHD1LQ86WJ1 AC008694.1-202ENST00000636953 945 ntBASIC24.85■■□□□ 1.57
CHD1LQ86WJ1 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHD1LQ86WJ1 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC24.85■■□□□ 1.57
CHD1LQ86WJ1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHD1LQ86WJ1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC24.85■■□□□ 1.57
CHD1LQ86WJ1 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHD1LQ86WJ1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHD1LQ86WJ1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC24.85■■□□□ 1.57
CHD1LQ86WJ1 AC010980.2-201ENST00000587099 1412 ntBASIC24.85■■□□□ 1.57
CHD1LQ86WJ1 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHD1LQ86WJ1 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
CHD1LQ86WJ1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
CHD1LQ86WJ1 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC24.85■■□□□ 1.57
CHD1LQ86WJ1 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHD1LQ86WJ1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
CHD1LQ86WJ1 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
CHD1LQ86WJ1 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHD1LQ86WJ1 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CHD1LQ86WJ1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHD1LQ86WJ1 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC24.84■■□□□ 1.57
CHD1LQ86WJ1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CHD1LQ86WJ1 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
CHD1LQ86WJ1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.84■■□□□ 1.57
CHD1LQ86WJ1 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC24.84■■□□□ 1.57
CHD1LQ86WJ1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC24.84■■□□□ 1.57
CHD1LQ86WJ1 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHD1LQ86WJ1 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC24.84■■□□□ 1.57
CHD1LQ86WJ1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC24.84■■□□□ 1.57
CHD1LQ86WJ1 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC24.84■■□□□ 1.57
CHD1LQ86WJ1 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHD1LQ86WJ1 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
CHD1LQ86WJ1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC24.84■■□□□ 1.57
CHD1LQ86WJ1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC24.83■■□□□ 1.57
CHD1LQ86WJ1 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHD1LQ86WJ1 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHD1LQ86WJ1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
CHD1LQ86WJ1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.83■■□□□ 1.57
CHD1LQ86WJ1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.83■■□□□ 1.57
CHD1LQ86WJ1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC24.83■■□□□ 1.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms