Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PACS1Q6VY07 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.31■□□□□ 0.84
PACS1Q6VY07 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PACS1Q6VY07 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PACS1Q6VY07 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.31■□□□□ 0.84
PACS1Q6VY07 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PACS1Q6VY07 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.31■□□□□ 0.84
PACS1Q6VY07 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.31■□□□□ 0.84
PACS1Q6VY07 AC016405.3-201ENST00000607710 860 ntBASIC20.31■□□□□ 0.84
PACS1Q6VY07 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PACS1Q6VY07 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.31■□□□□ 0.84
PACS1Q6VY07 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PACS1Q6VY07 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PACS1Q6VY07 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PACS1Q6VY07 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PACS1Q6VY07 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PACS1Q6VY07 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.31■□□□□ 0.84
PACS1Q6VY07 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.3■□□□□ 0.84
PACS1Q6VY07 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PACS1Q6VY07 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PACS1Q6VY07 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PACS1Q6VY07 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PACS1Q6VY07 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PACS1Q6VY07 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.3■□□□□ 0.84
PACS1Q6VY07 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PACS1Q6VY07 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PACS1Q6VY07 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PACS1Q6VY07 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.3■□□□□ 0.84
PACS1Q6VY07 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PACS1Q6VY07 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PACS1Q6VY07 CYP2T1P-201ENST00000432607 1285 ntBASIC20.3■□□□□ 0.84
PACS1Q6VY07 CDCA4P2-201ENST00000441182 718 ntBASIC20.3■□□□□ 0.84
PACS1Q6VY07 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.3■□□□□ 0.84
PACS1Q6VY07 RAP2CP1-201ENST00000605103 478 ntBASIC20.3■□□□□ 0.84
PACS1Q6VY07 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.3■□□□□ 0.84
PACS1Q6VY07 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PACS1Q6VY07 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PACS1Q6VY07 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.3■□□□□ 0.84
PACS1Q6VY07 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.3■□□□□ 0.84
PACS1Q6VY07 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.3■□□□□ 0.84
PACS1Q6VY07 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PACS1Q6VY07 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PACS1Q6VY07 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
PACS1Q6VY07 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.29■□□□□ 0.84
PACS1Q6VY07 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PACS1Q6VY07 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.29■□□□□ 0.84
PACS1Q6VY07 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.29■□□□□ 0.84
PACS1Q6VY07 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PACS1Q6VY07 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PACS1Q6VY07 RARRES2P4-201ENST00000514074 484 ntBASIC20.29■□□□□ 0.84
PACS1Q6VY07 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.29■□□□□ 0.84
PACS1Q6VY07 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.29■□□□□ 0.84
PACS1Q6VY07 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.29■□□□□ 0.84
PACS1Q6VY07 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.29■□□□□ 0.84
PACS1Q6VY07 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PACS1Q6VY07 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PACS1Q6VY07 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PACS1Q6VY07 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PACS1Q6VY07 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PACS1Q6VY07 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PACS1Q6VY07 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PACS1Q6VY07 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.28■□□□□ 0.84
PACS1Q6VY07 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.28■□□□□ 0.84
PACS1Q6VY07 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.28■□□□□ 0.84
PACS1Q6VY07 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PACS1Q6VY07 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PACS1Q6VY07 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PACS1Q6VY07 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PACS1Q6VY07 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.28■□□□□ 0.84
PACS1Q6VY07 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.28■□□□□ 0.84
PACS1Q6VY07 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PACS1Q6VY07 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PACS1Q6VY07 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PACS1Q6VY07 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PACS1Q6VY07 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PACS1Q6VY07 DPP3P2-201ENST00000416030 1696 ntBASIC20.28■□□□□ 0.84
PACS1Q6VY07 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PACS1Q6VY07 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PACS1Q6VY07 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS1Q6VY07 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.27■□□□□ 0.84
PACS1Q6VY07 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS1Q6VY07 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PACS1Q6VY07 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.27■□□□□ 0.84
PACS1Q6VY07 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.27■□□□□ 0.84
PACS1Q6VY07 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PACS1Q6VY07 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
PACS1Q6VY07 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS1Q6VY07 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS1Q6VY07 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.27■□□□□ 0.84
PACS1Q6VY07 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PACS1Q6VY07 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.27■□□□□ 0.84
PACS1Q6VY07 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
PACS1Q6VY07 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PACS1Q6VY07 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.27■□□□□ 0.84
PACS1Q6VY07 AC092666.2-201ENST00000613287 246 ntBASIC20.27■□□□□ 0.84
PACS1Q6VY07 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.27■□□□□ 0.84
PACS1Q6VY07 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.27■□□□□ 0.84
PACS1Q6VY07 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS1Q6VY07 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS1Q6VY07 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms