Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP1S1P61966 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP1S1P61966 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP1S1P61966 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP1S1P61966 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.27■□□□□ 0.84
AP1S1P61966 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
AP1S1P61966 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AP1S1P61966 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.27■□□□□ 0.84
AP1S1P61966 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP1S1P61966 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
AP1S1P61966 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
AP1S1P61966 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP1S1P61966 SOX15-203ENST00000570788 1093 ntBASIC20.27■□□□□ 0.84
AP1S1P61966 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
AP1S1P61966 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
AP1S1P61966 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP1S1P61966 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP1S1P61966 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AP1S1P61966 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
AP1S1P61966 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
AP1S1P61966 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.26■□□□□ 0.83
AP1S1P61966 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP1S1P61966 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.26■□□□□ 0.83
AP1S1P61966 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
AP1S1P61966 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.26■□□□□ 0.83
AP1S1P61966 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
AP1S1P61966 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP1S1P61966 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.26■□□□□ 0.83
AP1S1P61966 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.26■□□□□ 0.83
AP1S1P61966 UNC93B4-201ENST00000505679 747 ntBASIC20.26■□□□□ 0.83
AP1S1P61966 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC20.26■□□□□ 0.83
AP1S1P61966 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
AP1S1P61966 SMG8-203ENST00000578922 2178 ntBASIC20.26■□□□□ 0.83
AP1S1P61966 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
AP1S1P61966 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
AP1S1P61966 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
AP1S1P61966 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP1S1P61966 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP1S1P61966 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AP1S1P61966 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S1P61966 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
AP1S1P61966 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S1P61966 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S1P61966 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.25■□□□□ 0.83
AP1S1P61966 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S1P61966 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S1P61966 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S1P61966 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S1P61966 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
AP1S1P61966 AP003097.1-201ENST00000530657 1135 ntBASIC20.25■□□□□ 0.83
AP1S1P61966 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S1P61966 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S1P61966 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S1P61966 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S1P61966 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S1P61966 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.25■□□□□ 0.83
AP1S1P61966 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S1P61966 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.25■□□□□ 0.83
AP1S1P61966 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
AP1S1P61966 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
AP1S1P61966 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S1P61966 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S1P61966 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
AP1S1P61966 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.24■□□□□ 0.83
AP1S1P61966 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.24■□□□□ 0.83
AP1S1P61966 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
AP1S1P61966 AC026366.1-201ENST00000488803 879 ntBASIC20.24■□□□□ 0.83
AP1S1P61966 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S1P61966 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
AP1S1P61966 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC20.24■□□□□ 0.83
AP1S1P61966 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.24■□□□□ 0.83
AP1S1P61966 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S1P61966 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S1P61966 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S1P61966 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S1P61966 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S1P61966 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S1P61966 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S1P61966 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
AP1S1P61966 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.24■□□□□ 0.83
AP1S1P61966 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S1P61966 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
AP1S1P61966 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.24■□□□□ 0.83
AP1S1P61966 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP1S1P61966 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AP1S1P61966 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP1S1P61966 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP1S1P61966 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP1S1P61966 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP1S1P61966 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.23■□□□□ 0.83
AP1S1P61966 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.23■□□□□ 0.83
AP1S1P61966 MIR4651-201ENST00000582622 73 ntBASIC20.23■□□□□ 0.83
AP1S1P61966 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AP1S1P61966 AC006557.6-201ENST00000623071 864 ntBASIC20.23■□□□□ 0.83
AP1S1P61966 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.23■□□□□ 0.83
AP1S1P61966 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP1S1P61966 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
AP1S1P61966 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
AP1S1P61966 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
AP1S1P61966 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms