Protein–RNA interactions for Protein: P39967

UBP9, Ubiquitin carboxyl-terminal hydrolase 9, yeastyeast

Predictions only

Length 754 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP9P39967 SPT6YGR116W 4356 nt3.75□□□□□ -1.81
UBP9P39967 YLR035C-AYLR035C-A 3468 nt3.75□□□□□ -1.81
UBP9P39967 snR40snR40 97 nt3.75□□□□□ -1.81
UBP9P39967 ARP8YOR141C 2646 nt3.75□□□□□ -1.81
UBP9P39967 IRR1YIL026C 3453 nt3.75□□□□□ -1.81
UBP9P39967 PKH2YOL100W 3246 nt3.74□□□□□ -1.81
UBP9P39967 SNT1YCR033W 3681 nt3.74□□□□□ -1.81
UBP9P39967 VID27YNL212W 2349 nt3.74□□□□□ -1.81
UBP9P39967 YBR296C-AYBR296C-A 120 nt3.74□□□□□ -1.81
UBP9P39967 RPA135YPR010C 3612 nt3.74□□□□□ -1.81
UBP9P39967 RPM2YML091C 3609 nt3.74□□□□□ -1.81
UBP9P39967 AZF1YOR113W 2745 nt3.73□□□□□ -1.81
UBP9P39967 tV(CAC)DtV(CAC)D 73 nt3.73□□□□□ -1.81
UBP9P39967 tV(CAC)HtV(CAC)H 73 nt3.73□□□□□ -1.81
UBP9P39967 SMC1YFL008W 3678 nt3.73□□□□□ -1.81
UBP9P39967 RGA2YDR379W 3030 nt3.73□□□□□ -1.81
UBP9P39967 YGR109W-BYGR109W-B 4644 nt3.72□□□□□ -1.81
UBP9P39967 tF(GAA)DtF(GAA)D 73 nt3.72□□□□□ -1.81
UBP9P39967 tF(GAA)NtF(GAA)N 73 nt3.72□□□□□ -1.81
UBP9P39967 YOR161W-AYOR161W-A 81 nt3.72□□□□□ -1.81
UBP9P39967 RPS23BYPR132W 438 nt3.72□□□□□ -1.81
UBP9P39967 MSH5YDL154W 2706 nt3.72□□□□□ -1.81
UBP9P39967 DGR2YKL121W 2559 nt3.72□□□□□ -1.81
UBP9P39967 SRO77YBL106C 3033 nt3.71□□□□□ -1.81
UBP9P39967 TIM12YBR091C 330 nt3.71□□□□□ -1.82
UBP9P39967 XRS2YDR369C 2565 nt3.71□□□□□ -1.82
UBP9P39967 YME2YMR302C 2553 nt3.71□□□□□ -1.82
UBP9P39967 FIR1YER032W 2631 nt3.71□□□□□ -1.82
UBP9P39967 DUG2YBR281C 2637 nt3.7□□□□□ -1.82
UBP9P39967 KTI11YBL071W-A 249 nt3.7□□□□□ -1.82
UBP9P39967 MDN1YLR106C 14733 nt3.7□□□□□ -1.82
UBP9P39967 APL4YPR029C 2499 nt3.7□□□□□ -1.82
UBP9P39967 PIK1YNL267W 3201 nt3.69□□□□□ -1.82
UBP9P39967 STE6YKL209C 3873 nt3.69□□□□□ -1.82
UBP9P39967 SSM4YIL030C 3960 nt3.69□□□□□ -1.82
UBP9P39967 SMC2YFR031C 3513 nt3.69□□□□□ -1.82
UBP9P39967 YDR186CYDR186C 2634 nt3.68□□□□□ -1.82
UBP9P39967 SEG1YMR086W 2883 nt3.68□□□□□ -1.82
UBP9P39967 STU2YLR045C 2667 nt3.67□□□□□ -1.82
UBP9P39967 PAU8YAL068C 363 nt3.67□□□□□ -1.82
UBP9P39967 PAU20YOL161C 363 nt3.67□□□□□ -1.82
UBP9P39967 YGL140CYGL140C 3660 nt3.66□□□□□ -1.82
UBP9P39967 NPR3YHL023C 3441 nt3.66□□□□□ -1.82
UBP9P39967 ARO1YDR127W 4767 nt3.66□□□□□ -1.82
UBP9P39967 ENV11YGR071C 2583 nt3.66□□□□□ -1.82
UBP9P39967 YTA7YGR270W 4140 nt3.66□□□□□ -1.82
UBP9P39967 MDS3YGL197W 4464 nt3.66□□□□□ -1.82
UBP9P39967 SWI1YPL016W 3945 nt3.65□□□□□ -1.82
UBP9P39967 DAN4YJR151C 3486 nt3.65□□□□□ -1.82
UBP9P39967 SAP190YKR028W 3102 nt3.65□□□□□ -1.83
UBP9P39967 SAS3YBL052C 2496 nt3.65□□□□□ -1.83
UBP9P39967 UFD2YDL190C 2886 nt3.65□□□□□ -1.83
UBP9P39967 TBS1YBR150C 3285 nt3.64□□□□□ -1.83
UBP9P39967 YLR299C-AYLR299C-A 93 nt3.64□□□□□ -1.83
UBP9P39967 RRP12YPL012W 3687 nt3.64□□□□□ -1.83
UBP9P39967 IST2YBR086C 2841 nt3.63□□□□□ -1.83
UBP9P39967 YDL073WYDL073W 2955 nt3.63□□□□□ -1.83
UBP9P39967 BNI4YNL233W 2679 nt3.63□□□□□ -1.83
UBP9P39967 YCG1YDR325W 3108 nt3.62□□□□□ -1.83
UBP9P39967 YPR022CYPR022C 3402 nt3.62□□□□□ -1.83
UBP9P39967 YML054C-AYML054C-A 159 nt3.62□□□□□ -1.83
UBP9P39967 STE23YLR389C 3084 nt3.62□□□□□ -1.83
UBP9P39967 URA2YJL130C 6645 nt3.61□□□□□ -1.83
UBP9P39967 NOP10YHR072W-A 177 nt3.6□□□□□ -1.83
UBP9P39967 VPS16YPL045W 2397 nt3.59□□□□□ -1.83
UBP9P39967 YBR200W-AYBR200W-A 165 nt3.59□□□□□ -1.83
UBP9P39967 ORC1YML065W 2745 nt3.59□□□□□ -1.83
UBP9P39967 STB4YMR019W 2850 nt3.58□□□□□ -1.84
UBP9P39967 SET1YHR119W 3243 nt3.58□□□□□ -1.84
UBP9P39967 YMR317WYMR317W 3423 nt3.58□□□□□ -1.84
UBP9P39967 YDR209CYDR209C 414 nt3.58□□□□□ -1.84
UBP9P39967 MYO3YKL129C 3819 nt3.58□□□□□ -1.84
UBP9P39967 EST2YLR318W 2655 nt3.58□□□□□ -1.84
UBP9P39967 PSY2YNL201C 2577 nt3.57□□□□□ -1.84
UBP9P39967 AGC1YPR021C 2709 nt3.57□□□□□ -1.84
UBP9P39967 ITC1YGL133W 3795 nt3.57□□□□□ -1.84
UBP9P39967 YHR180C-BYHR180C-B 105 nt3.57□□□□□ -1.84
UBP9P39967 SAP185YJL098W 3177 nt3.57□□□□□ -1.84
UBP9P39967 SLN1YIL147C 3663 nt3.57□□□□□ -1.84
UBP9P39967 HEF3YNL014W 3135 nt3.56□□□□□ -1.84
UBP9P39967 RAD9YDR217C 3930 nt3.55□□□□□ -1.84
UBP9P39967 SPA2YLL021W 4401 nt3.55□□□□□ -1.84
UBP9P39967 FLO10YKR102W 3510 nt3.55□□□□□ -1.84
UBP9P39967 YKL100W-AYKL100W-A 90 nt3.55□□□□□ -1.84
UBP9P39967 INP52YNL106C 3552 nt3.55□□□□□ -1.84
UBP9P39967 YHR080CYHR080C 4038 nt3.55□□□□□ -1.84
UBP9P39967 NUP159YIL115C 4383 nt3.54□□□□□ -1.84
UBP9P39967 AUS1YOR011W 4185 nt3.54□□□□□ -1.84
UBP9P39967 CAF130YGR134W 3369 nt3.53□□□□□ -1.84
UBP9P39967 BUL2YML111W 2763 nt3.53□□□□□ -1.84
UBP9P39967 CIN8YEL061C 3003 nt3.52□□□□□ -1.85
UBP9P39967 MET10YFR030W 3108 nt3.52□□□□□ -1.85
UBP9P39967 NNF2YGR089W 2811 nt3.52□□□□□ -1.85
UBP9P39967 tD(GUC)QtD(GUC)Q 75 nt3.52□□□□□ -1.85
UBP9P39967 RAD26YJR035W 3258 nt3.52□□□□□ -1.85
UBP9P39967 EPL1YFL024C 2499 nt3.51□□□□□ -1.85
UBP9P39967 BEM3YPL115C 3387 nt3.51□□□□□ -1.85
UBP9P39967 HFM1YGL251C 3564 nt3.51□□□□□ -1.85
UBP9P39967 CHS1YNL192W 3396 nt3.51□□□□□ -1.85
UBP9P39967 SMC3YJL074C 3693 nt3.5□□□□□ -1.85
Retrieved 100 of 7,029 protein–RNA pairs in 62.6 ms