Protein–RNA interactions for Protein: P02381

VAR1, Ribosomal protein VAR1, mitochondrial, yeastyeast

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VAR1P02381 PRE4YFR050C 801 nt0.64□□□□□ -2.31
VAR1P02381 ECL1YGR146C 636 nt0.64□□□□□ -2.31
VAR1P02381 YHL041WYHL041W 450 nt0.64□□□□□ -2.31
VAR1P02381 RPL26AYLR344W 384 nt0.64□□□□□ -2.31
VAR1P02381 YLR456WYLR456W 615 nt0.64□□□□□ -2.31
VAR1P02381 YBR076C-AYBR076C-A 267 nt0.64□□□□□ -2.31
VAR1P02381 RFX1YLR176C 2436 nt0.63□□□□□ -2.31
VAR1P02381 SWI6YLR182W 2412 nt0.63□□□□□ -2.31
VAR1P02381 TIM13YGR181W 318 nt0.63□□□□□ -2.31
VAR1P02381 YJL135WYJL135W 318 nt0.63□□□□□ -2.31
VAR1P02381 GEA2YEL022W 4380 nt0.63□□□□□ -2.31
VAR1P02381 NOC3YLR002C 1992 nt0.63□□□□□ -2.31
VAR1P02381 SPT21YMR179W 2277 nt0.62□□□□□ -2.31
VAR1P02381 FIG4YNL325C 2640 nt0.62□□□□□ -2.31
VAR1P02381 snR72snR72 98 nt0.62□□□□□ -2.31
VAR1P02381 YDR114CYDR114C 303 nt0.62□□□□□ -2.31
VAR1P02381 YDR269CYDR269C 324 nt0.62□□□□□ -2.31
VAR1P02381 YER006C-AYER006C-A 318 nt0.62□□□□□ -2.31
VAR1P02381 YJL020W-AYJL020W-A 258 nt0.62□□□□□ -2.31
VAR1P02381 UPS1YLR193C 528 nt0.62□□□□□ -2.31
VAR1P02381 YBR221W-AYBR221W-A 105 nt0.62□□□□□ -2.31
VAR1P02381 YLL054CYLL054C 2532 nt0.62□□□□□ -2.31
VAR1P02381 YDL011CYDL011C 324 nt0.61□□□□□ -2.31
VAR1P02381 YAP6YDR259C 1152 nt0.61□□□□□ -2.31
VAR1P02381 YPL182CYPL182C 384 nt0.61□□□□□ -2.31
VAR1P02381 APL3YBL037W 3078 nt0.61□□□□□ -2.31
VAR1P02381 MPT5YGL178W 2580 nt0.61□□□□□ -2.31
VAR1P02381 STB6YKL072W 2301 nt0.61□□□□□ -2.31
VAR1P02381 NUP145YGL092W 3954 nt0.61□□□□□ -2.31
VAR1P02381 ENV11YGR071C 2583 nt0.6□□□□□ -2.31
VAR1P02381 STO1YMR125W 2586 nt0.6□□□□□ -2.31
VAR1P02381 EFR3YMR212C 2349 nt0.6□□□□□ -2.31
VAR1P02381 YIL059CYIL059C 366 nt0.6□□□□□ -2.31
VAR1P02381 YJR157WYJR157W 363 nt0.6□□□□□ -2.31
VAR1P02381 RPS27AYKL156W 249 nt0.6□□□□□ -2.31
VAR1P02381 YLR202CYLR202C 327 nt0.6□□□□□ -2.31
VAR1P02381 YBL008W-AYBL008W-A 240 nt0.6□□□□□ -2.31
VAR1P02381 YMR031W-AYMR031W-A 327 nt0.6□□□□□ -2.31
VAR1P02381 RPB10YOR210W 213 nt0.6□□□□□ -2.31
VAR1P02381 DIE2YGR227W 1578 nt0.6□□□□□ -2.31
VAR1P02381 PCF11YDR228C 1881 nt0.6□□□□□ -2.31
VAR1P02381 SEC1YDR164C 2175 nt0.6□□□□□ -2.31
VAR1P02381 RKR1YMR247C 4689 nt0.6□□□□□ -2.31
VAR1P02381 SET3YKR029C 2256 nt0.59□□□□□ -2.31
VAR1P02381 SDH7YDR511W 402 nt0.59□□□□□ -2.31
VAR1P02381 YKL083WYKL083W 615 nt0.59□□□□□ -2.31
VAR1P02381 YMR272W-AYMR272W-A 114 nt0.59□□□□□ -2.31
VAR1P02381 LCD1YDR499W 2244 nt0.58□□□□□ -2.32
VAR1P02381 APL2YKL135C 2181 nt0.58□□□□□ -2.32
VAR1P02381 NPC2YDL046W 522 nt0.58□□□□□ -2.32
VAR1P02381 YGR042WYGR042W 816 nt0.58□□□□□ -2.32
VAR1P02381 ISF1YMR081C 1017 nt0.58□□□□□ -2.32
VAR1P02381 YPR159C-AYPR159C-A 102 nt0.58□□□□□ -2.32
VAR1P02381 snR51snR51 107 nt0.58□□□□□ -2.32
VAR1P02381 AIM9YER080W 1884 nt0.58□□□□□ -2.32
VAR1P02381 SWI4YER111C 3282 nt0.58□□□□□ -2.32
VAR1P02381 NHP2YDL208W 471 nt0.57□□□□□ -2.32
VAR1P02381 ZIP2YGL249W 2115 nt0.57□□□□□ -2.32
VAR1P02381 YAR047CYAR047C 321 nt0.57□□□□□ -2.32
VAR1P02381 RRT1YBL048W 312 nt0.57□□□□□ -2.32
VAR1P02381 MRPL50YNR022C 420 nt0.57□□□□□ -2.32
VAR1P02381 IRC23YOR044W 474 nt0.57□□□□□ -2.32
VAR1P02381 CLU1YMR012W 3834 nt0.56□□□□□ -2.32
VAR1P02381 NUT1YGL151W 3399 nt0.56□□□□□ -2.32
VAR1P02381 PAC1YOR269W 1485 nt0.56□□□□□ -2.32
VAR1P02381 YCS4YLR272C 3531 nt0.56□□□□□ -2.32
VAR1P02381 YDR521WYDR521W 336 nt0.56□□□□□ -2.32
VAR1P02381 YLR434CYLR434C 384 nt0.56□□□□□ -2.32
VAR1P02381 YOR199WYOR199W 330 nt0.56□□□□□ -2.32
VAR1P02381 Q0017Q0017 162 nt0.56□□□□□ -2.32
VAR1P02381 YJR003CYJR003C 1560 nt0.56□□□□□ -2.32
VAR1P02381 COG4YPR105C 2586 nt0.55□□□□□ -2.32
VAR1P02381 SLY1YDR189W 2001 nt0.55□□□□□ -2.32
VAR1P02381 Q0144Q0144 330 nt0.55□□□□□ -2.32
VAR1P02381 YLR406C-AYLR406C-A 150 nt0.55□□□□□ -2.32
VAR1P02381 CMC4YMR194C-B 222 nt0.55□□□□□ -2.32
VAR1P02381 YPL068CYPL068C 882 nt0.55□□□□□ -2.32
VAR1P02381 SLI15YBR156C 2097 nt0.54□□□□□ -2.32
VAR1P02381 RPS24BYIL069C 408 nt0.54□□□□□ -2.32
VAR1P02381 YIL142C-AYIL142C-A 333 nt0.54□□□□□ -2.32
VAR1P02381 VPS20YMR077C 666 nt0.54□□□□□ -2.32
VAR1P02381 YBR012CYBR012C 420 nt0.54□□□□□ -2.32
VAR1P02381 YOR161W-BYOR161W-B 261 nt0.54□□□□□ -2.32
VAR1P02381 YPL205CYPL205C 345 nt0.54□□□□□ -2.32
VAR1P02381 YPL229WYPL229W 621 nt0.54□□□□□ -2.32
VAR1P02381 YDL206WYDL206W 2289 nt0.53□□□□□ -2.32
VAR1P02381 AIM44YPL158C 2277 nt0.53□□□□□ -2.32
VAR1P02381 SWF1YDR126W 1011 nt0.53□□□□□ -2.32
VAR1P02381 YOR032W-AYOR032W-A 201 nt0.53□□□□□ -2.32
VAR1P02381 YBR200W-AYBR200W-A 165 nt0.53□□□□□ -2.32
VAR1P02381 NUP157YER105C 4176 nt0.53□□□□□ -2.33
VAR1P02381 tT(AGU)BtT(AGU)B 73 nt0.52□□□□□ -2.33
VAR1P02381 tT(AGU)CtT(AGU)C 73 nt0.52□□□□□ -2.33
VAR1P02381 tT(AGU)DtT(AGU)D 73 nt0.52□□□□□ -2.33
VAR1P02381 tT(AGU)HtT(AGU)H 73 nt0.52□□□□□ -2.33
VAR1P02381 tT(AGU)I1tT(AGU)I1 73 nt0.52□□□□□ -2.33
VAR1P02381 tT(AGU)I2tT(AGU)I2 73 nt0.52□□□□□ -2.33
VAR1P02381 tT(AGU)JtT(AGU)J 73 nt0.52□□□□□ -2.33
VAR1P02381 tT(AGU)N1tT(AGU)N1 73 nt0.52□□□□□ -2.33
VAR1P02381 tT(AGU)N2tT(AGU)N2 73 nt0.52□□□□□ -2.33
Retrieved 100 of 7,029 protein–RNA pairs in 89.5 ms