Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRKNO60260 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PRKNO60260 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRKNO60260 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.74■□□□□ 0.59
PRKNO60260 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRKNO60260 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.74■□□□□ 0.59
PRKNO60260 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PRKNO60260 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PRKNO60260 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.74■□□□□ 0.59
PRKNO60260 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRKNO60260 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRKNO60260 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
PRKNO60260 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PRKNO60260 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRKNO60260 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRKNO60260 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.73■□□□□ 0.59
PRKNO60260 POU5F1P3-201ENST00000428824 1078 ntBASIC18.73■□□□□ 0.59
PRKNO60260 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.73■□□□□ 0.59
PRKNO60260 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRKNO60260 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRKNO60260 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.73■□□□□ 0.59
PRKNO60260 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRKNO60260 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRKNO60260 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRKNO60260 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRKNO60260 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRKNO60260 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRKNO60260 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRKNO60260 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.73■□□□□ 0.59
PRKNO60260 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PRKNO60260 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.73■□□□□ 0.59
PRKNO60260 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.73■□□□□ 0.59
PRKNO60260 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PRKNO60260 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PRKNO60260 DPP3P2-201ENST00000416030 1696 ntBASIC18.73■□□□□ 0.59
PRKNO60260 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.72■□□□□ 0.59
PRKNO60260 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PRKNO60260 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.72■□□□□ 0.59
PRKNO60260 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRKNO60260 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
PRKNO60260 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.72■□□□□ 0.59
PRKNO60260 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRKNO60260 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRKNO60260 ESRRAP1-201ENST00000400596 1257 ntBASIC18.72■□□□□ 0.59
PRKNO60260 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.72■□□□□ 0.59
PRKNO60260 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRKNO60260 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.72■□□□□ 0.59
PRKNO60260 AC008403.3-201ENST00000598924 454 ntBASIC18.72■□□□□ 0.59
PRKNO60260 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PRKNO60260 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.72■□□□□ 0.59
PRKNO60260 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.72■□□□□ 0.59
PRKNO60260 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.72■□□□□ 0.59
PRKNO60260 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRKNO60260 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRKNO60260 AC092720.2-201ENST00000602388 1665 ntBASIC18.72■□□□□ 0.59
PRKNO60260 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.72■□□□□ 0.59
PRKNO60260 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PRKNO60260 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.72■□□□□ 0.59
PRKNO60260 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.72■□□□□ 0.59
PRKNO60260 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PRKNO60260 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
PRKNO60260 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRKNO60260 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRKNO60260 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRKNO60260 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.71■□□□□ 0.59
PRKNO60260 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRKNO60260 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.71■□□□□ 0.59
PRKNO60260 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRKNO60260 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRKNO60260 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRKNO60260 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRKNO60260 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRKNO60260 FAM201B-201ENST00000458407 597 ntBASIC18.71■□□□□ 0.59
PRKNO60260 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.71■□□□□ 0.59
PRKNO60260 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.71■□□□□ 0.59
PRKNO60260 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.71■□□□□ 0.59
PRKNO60260 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRKNO60260 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRKNO60260 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRKNO60260 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PRKNO60260 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRKNO60260 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRKNO60260 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRKNO60260 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRKNO60260 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRKNO60260 AP005212.1-201ENST00000581547 1997 ntBASIC18.7■□□□□ 0.58
PRKNO60260 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.7■□□□□ 0.58
PRKNO60260 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC18.7■□□□□ 0.58
PRKNO60260 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRKNO60260 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.7■□□□□ 0.58
PRKNO60260 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRKNO60260 AL512408.1-201ENST00000569378 2000 ntBASIC18.7■□□□□ 0.58
PRKNO60260 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.7■□□□□ 0.58
PRKNO60260 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRKNO60260 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRKNO60260 AC020907.5-201ENST00000624372 1936 ntBASIC18.7■□□□□ 0.58
PRKNO60260 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRKNO60260 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRKNO60260 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRKNO60260 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms