Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KDELR3O43731 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
KDELR3O43731 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
KDELR3O43731 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
KDELR3O43731 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KDELR3O43731 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KDELR3O43731 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KDELR3O43731 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KDELR3O43731 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.44■□□□□ 0.86
KDELR3O43731 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KDELR3O43731 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
KDELR3O43731 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.44■□□□□ 0.86
KDELR3O43731 ESRRAP1-201ENST00000400596 1257 ntBASIC20.44■□□□□ 0.86
KDELR3O43731 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
KDELR3O43731 AP003097.1-201ENST00000530657 1135 ntBASIC20.44■□□□□ 0.86
KDELR3O43731 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.44■□□□□ 0.86
KDELR3O43731 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.44■□□□□ 0.86
KDELR3O43731 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.44■□□□□ 0.86
KDELR3O43731 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
KDELR3O43731 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
KDELR3O43731 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KDELR3O43731 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KDELR3O43731 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
KDELR3O43731 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KDELR3O43731 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
KDELR3O43731 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KDELR3O43731 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KDELR3O43731 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDELR3O43731 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDELR3O43731 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KDELR3O43731 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.43■□□□□ 0.86
KDELR3O43731 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDELR3O43731 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDELR3O43731 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDELR3O43731 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDELR3O43731 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KDELR3O43731 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDELR3O43731 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDELR3O43731 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDELR3O43731 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.43■□□□□ 0.86
KDELR3O43731 TSPY20P-201ENST00000450910 630 ntBASIC20.43■□□□□ 0.86
KDELR3O43731 HES2-206ENST00000489730 730 ntTSL 2 BASIC20.43■□□□□ 0.86
KDELR3O43731 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KDELR3O43731 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.43■□□□□ 0.86
KDELR3O43731 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.43■□□□□ 0.86
KDELR3O43731 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDELR3O43731 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.43■□□□□ 0.86
KDELR3O43731 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
KDELR3O43731 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KDELR3O43731 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDELR3O43731 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.43■□□□□ 0.86
KDELR3O43731 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.43■□□□□ 0.86
KDELR3O43731 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KDELR3O43731 AL512408.1-201ENST00000569378 2000 ntBASIC20.43■□□□□ 0.86
KDELR3O43731 AC092667.1-201ENST00000434301 2586 ntBASIC20.42■□□□□ 0.86
KDELR3O43731 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDELR3O43731 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.42■□□□□ 0.86
KDELR3O43731 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDELR3O43731 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.42■□□□□ 0.86
KDELR3O43731 AL162377.1-201ENST00000618844 1793 ntBASIC20.42■□□□□ 0.86
KDELR3O43731 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.42■□□□□ 0.86
KDELR3O43731 AL157384.1-201ENST00000445995 2473 ntBASIC20.42■□□□□ 0.86
KDELR3O43731 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDELR3O43731 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDELR3O43731 POU5F1P3-201ENST00000428824 1078 ntBASIC20.42■□□□□ 0.86
KDELR3O43731 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KDELR3O43731 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KDELR3O43731 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC20.42■□□□□ 0.86
KDELR3O43731 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
KDELR3O43731 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KDELR3O43731 AC008687.6-201ENST00000596318 630 ntBASIC20.42■□□□□ 0.86
KDELR3O43731 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KDELR3O43731 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDELR3O43731 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDELR3O43731 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDELR3O43731 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
KDELR3O43731 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.42■□□□□ 0.86
KDELR3O43731 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.42■□□□□ 0.86
KDELR3O43731 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.42■□□□□ 0.86
KDELR3O43731 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDELR3O43731 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDELR3O43731 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KDELR3O43731 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KDELR3O43731 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KDELR3O43731 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
KDELR3O43731 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KDELR3O43731 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
KDELR3O43731 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
KDELR3O43731 LINC01006-201ENST00000333319 2292 ntBASIC20.41■□□□□ 0.86
KDELR3O43731 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
KDELR3O43731 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KDELR3O43731 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
KDELR3O43731 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC20.41■□□□□ 0.86
KDELR3O43731 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.41■□□□□ 0.86
KDELR3O43731 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
KDELR3O43731 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.41■□□□□ 0.86
KDELR3O43731 AC120498.8-201ENST00000614275 531 ntBASIC20.41■□□□□ 0.86
KDELR3O43731 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KDELR3O43731 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KDELR3O43731 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms