Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 AL390719.1-204ENST00000412397 1219 ntBASIC21.27■■□□□ 1
CLDN5O00501 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.27■■□□□ 1
CLDN5O00501 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CLDN5O00501 HES2-206ENST00000489730 730 ntTSL 2 BASIC21.27■■□□□ 1
CLDN5O00501 AC023632.3-201ENST00000521633 145 ntBASIC21.27■■□□□ 1
CLDN5O00501 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN5O00501 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN5O00501 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
CLDN5O00501 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.27■■□□□ 1
CLDN5O00501 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN5O00501 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
CLDN5O00501 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CLDN5O00501 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
CLDN5O00501 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN5O00501 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN5O00501 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN5O00501 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.26■□□□□ 0.99
CLDN5O00501 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN5O00501 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN5O00501 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
CLDN5O00501 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.26■□□□□ 0.99
CLDN5O00501 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN5O00501 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN5O00501 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC21.26■□□□□ 0.99
CLDN5O00501 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC21.26■□□□□ 0.99
CLDN5O00501 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
CLDN5O00501 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.26■□□□□ 0.99
CLDN5O00501 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.26■□□□□ 0.99
CLDN5O00501 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN5O00501 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN5O00501 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN5O00501 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN5O00501 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CLDN5O00501 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC21.26■□□□□ 0.99
CLDN5O00501 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN5O00501 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN5O00501 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.25■□□□□ 0.99
CLDN5O00501 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN5O00501 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN5O00501 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CLDN5O00501 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN5O00501 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.25■□□□□ 0.99
CLDN5O00501 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
CLDN5O00501 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
CLDN5O00501 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CLDN5O00501 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.25■□□□□ 0.99
CLDN5O00501 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
CLDN5O00501 AC120498.8-201ENST00000614275 531 ntBASIC21.25■□□□□ 0.99
CLDN5O00501 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
CLDN5O00501 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN5O00501 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CLDN5O00501 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN5O00501 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN5O00501 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.24■□□□□ 0.99
CLDN5O00501 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN5O00501 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN5O00501 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN5O00501 AC098590.1-201ENST00000468126 897 ntBASIC21.24■□□□□ 0.99
CLDN5O00501 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
CLDN5O00501 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN5O00501 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CLDN5O00501 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN5O00501 AC092667.1-201ENST00000434301 2586 ntBASIC21.24■□□□□ 0.99
CLDN5O00501 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CLDN5O00501 AC020907.5-201ENST00000624372 1936 ntBASIC21.23■□□□□ 0.99
CLDN5O00501 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN5O00501 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN5O00501 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
CLDN5O00501 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC21.23■□□□□ 0.99
CLDN5O00501 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN5O00501 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CLDN5O00501 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN5O00501 AC124283.5-201ENST00000624661 1809 ntBASIC21.23■□□□□ 0.99
CLDN5O00501 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN5O00501 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN5O00501 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN5O00501 POM121L13P-201ENST00000422362 380 ntBASIC21.23■□□□□ 0.99
CLDN5O00501 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
CLDN5O00501 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC21.23■□□□□ 0.99
CLDN5O00501 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.23■□□□□ 0.99
CLDN5O00501 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.23■□□□□ 0.99
CLDN5O00501 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC21.23■□□□□ 0.99
CLDN5O00501 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.23■□□□□ 0.99
CLDN5O00501 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN5O00501 AL157384.1-201ENST00000445995 2473 ntBASIC21.23■□□□□ 0.99
CLDN5O00501 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
CLDN5O00501 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN5O00501 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
CLDN5O00501 FEM1AP1-201ENST00000431297 1995 ntBASIC21.23■□□□□ 0.99
CLDN5O00501 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC21.23■□□□□ 0.99
CLDN5O00501 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.23■□□□□ 0.99
CLDN5O00501 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN5O00501 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.22■□□□□ 0.99
CLDN5O00501 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN5O00501 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN5O00501 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CLDN5O00501 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN5O00501 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CLDN5O00501 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.22■□□□□ 0.99
CLDN5O00501 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms